Traes_4DL_67EFB6303 (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_4DL_67EFB6303 T256564_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
A1YJE4_HORVD
M10900_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM10_01
0.833 0.833
MAD55_ORYSJ
M10962_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS55_01
0.812 0.812
Q4U0F1_WHEAT
M10978_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT2_01
0.812 0.812
SVP
M06984_2.00
Arabidopsis thaliana
DDCCVAAWANGGHAA

TTDCCNTWTTBGGHH
Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b
0.771 0.771
SVP
M06985_2.00
Arabidopsis thaliana
CCMAAWANGGWAANW

WNTTWCCNTWTTKGG
Dap-seq
OMalley et al.(2016)
SVP_col_v3b
0.771 0.771
SVP
M08424_2.00
Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH

DDYTTTCCHTTTTKGGDWWN
ChIP-chip
Mathelier et al.(2014)
MA0555.1
0.771 0.771
squamosa
M02697_2.00
Antirrhinum majus
MYAWAWAWRGHAAN

NTTDCYWTWTWTRK
SELEX
Mathelier et al.(2014)
MA0082.1
0.729 0.729
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.729 0.729
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.729 0.729
O82699_MALDO
M11022_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_01
0.729 0.729
Q8GT99_TOBAC
M11006_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_02
0.729 0.729
MADS50
M10968_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS50_01
0.729 0.729
Q9SBQ1_PETHY
M11017_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PFG_01
0.729 0.729
Q38742_ANTMA
M11000_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SQUA_01
0.729 0.729
AGL15
M06992_2.00
Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN

NTTTCYWHWTTDGGWAANW
Dap-seq
OMalley et al.(2016)
AGL15_col_a
0.708 0.708
AGL15
M06993_2.00
Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH

DDNTTTCYHHWTTDGGWAANH
Dap-seq
OMalley et al.(2016)
AGL15_colamp_a
0.708 0.708
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW

WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
0.708 0.708
AP1
M08144_2.00
Arabidopsis thaliana
MYAAAAAWRGAAA

TTTCYWTTTTTRK
ChIP-seq
Mathelier et al.(2014)
MA0940.1
0.708 0.708
SOC1
M08425_2.00
Arabidopsis thaliana
CCAAAAAWRGAAAND

HNTTTCYWTTTTTGG
ChIP-chip
Mathelier et al.(2014)
MA0554.1
0.708 0.708
AGL15
M10927_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_01
0.708 0.708
AGL15
M10928_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_02
0.708 0.708
SOC1
M10915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL20_01
0.708 0.708
SEP2
M10916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL4_01
0.708 0.708
Q9LEH9_HORVU
M10983_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM9_01
0.708 0.708
Q9ATE3_PETHY
M11008_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP28_01
0.708 0.708
MAD17_ORYSJ
M10961_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
0.708 0.708
MADS6
M10967_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
0.708 0.708
AP1
M10905_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSA_Q2
0.708 0.708
Q84LI3_WHEAT
M10979_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT1_01
0.708 0.708
O82128_WHEAT
M10965_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WAP1_01
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4DL_67EFB6303.2 MADS box 12 59

Links

Other MADS box family TFs
Other Triticum aestivum TFs

841 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
stuA Aspergillus nidulans CADANIAG00007206 D 0.000
SOK2 Saccharomyces cerevisiae YMR016C D 0.000
PITC_041890 Penicillium italicum PITC_041890 I 0.000
PNEG_01921 Pneumocystis murina PNEG_01921 I 0.000
PODANS_2_890 Podospora anserina PODANS_2_890 I 0.000
PTRG_01883 Pyrenophora triticirepentis PTRG_01883 I 0.000
PTT_19958 Pyrenophora teres PTT_19958 I 0.000
PV09_05716 Verruconis gallopava PV09_05716 I 0.000
SETTUDRAFT_91357 Setosphaeria turcica SETTUDRAFT_91357 I 0.000
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.000
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.000
PDIP_46840 Penicillium digitatum PDIP_46840 I 0.000
PDE_04095 Penicillium oxalicum PDE_04095 I 0.000
PCH_Pc13g04920 Penicillium rubens PCH_Pc13g04920 I 0.000
OIDMADRAFT_111132 Oidiodendron maius OIDMADRAFT_111132 I 0.000
MYCTH_93313 Myceliophthora thermophila MYCTH_93313 I 0.000
MGG_00692 Magnaporthe oryzae MGG_00692 I 0.000
MAPG_07556 Magnaporthe poae MAPG_07556 I 0.000
SNOG_14941 Phaeosphaeria nodorum SNOG_14941 I 0.000
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.000
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.000
Pc13g04920 Penicillium chrysogenum Pc13g04920 I 0.000
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.000
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I 0.000
PredSwiss_EST560.1 Pneumocystis carinii PredSwiss_EST560.1 I 0.000
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.000
estExt_fgenesh1_pg.C_220129 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_220129 I 0.000
YALI0_B19602g Yarrowia lipolytica YALI0_B19602g I 0.000
W97_03035 Coniosporium apollinis W97_03035 I 0.000
VHEMI10191 Torrubiella hemipterigena VHEMI10191 I 0.000
VDBG_00362 Verticillium alfalfae VDBG_00362 I 0.000
VDAG_08656 Verticillium dahliae VDAG_08656 I 0.000
UCRPA7_4586 Togninia minima UCRPA7_4586 I 0.000
U727_0042987021 Penicillium solitum U727_0042987021 I 0.000
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.000
SPBR_02388 Sporothrix brasiliensis SPBR_02388 I 0.000
LEMA_P011910.1 Leptosphaeria maculans LEMA_P011910.1 I 0.000
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.000
COCCADRAFT_26917 Bipolaris zeicola COCCADRAFT_26917 I 0.000
COCC4DRAFT_44406 Bipolaris maydis COCC4DRAFT_44406 I 0.000
CMQ_1733 Grosmannia clavigera CMQ_1733 I 0.000
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.000
CD36_33560 Candida dubliniensis CD36_33560 I 0.000
CaO19.8243 Candida albicans CaO19.8243 I 0.000
CaO19.610 Candida albicans CaO19.610 I 0.000
ATEG_09634 Aspergillus terreus CADATEAG00005510 I 0.000
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.000
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.000
BBA_04713 Beauveria bassiana BBA_04713 I 0.000
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.000
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.000
VDBG_00362 Verticillium albo atrum VDBG_00362 I 0.000
SNOG_14941 Stagonospora nodorum SNOG_14941 I 0.000
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.000
COCCADRAFT_73688 Bipolaris zeicola COCCADRAFT_73688 I 0.000
COCMIDRAFT_103135 Bipolaris oryzae COCMIDRAFT_103135 I 0.000
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I 0.000
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.000
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.000
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.000
HMPREF1624_02851 Sporothrix schenckii HMPREF1624_02851 I 0.000
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.000
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.000
GGTG_14065 Gaeumannomyces graminis GGTG_14065 I 0.000
G210_4810 Candida maltosa G210_4810 I 0.000
F503_05005 Ophiostoma piceae uamh F503_05005 I 0.000
EV44_g0662 Erysiphe necator EV44_g0662 I 0.000
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.000
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.000
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.000
COCVIDRAFT_16107 Bipolaris victoriae COCVIDRAFT_16107 I 0.000
COCSADRAFT_302496 Bipolaris sorokiniana COCSADRAFT_302496 I 0.000
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.000