Ca_04661 (Cicer arietinum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ca_04661 T256890_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_04661 MADS box 17 64

Links

Other MADS box family TFs
Other Cicer arietinum TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGL62 Arabidopsis thaliana AT5G60440 I 0.854
MDP0000434703 Malus domestica MDP0000434703 I 0.875
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.842
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.750
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.833
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.729
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.729
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.812
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.729
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.812
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.812
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.708
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.771
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.771
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.812
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.812
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.729
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.833
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.812
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.771
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.812
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.771
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.812
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.750
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.792
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.771
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.812
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.792
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.792
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.729
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.792
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.792
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.854
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.792
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.792
mgf024307m Mimulus guttatus mgf024307m N 0.771
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.833
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.875
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.854
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.854
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.812
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.792
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.812
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.792
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.771
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.771
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.792
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.771
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.792
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.833
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.750
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.812
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.812
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.708
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.833
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.771
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.750
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.833
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.812
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.729
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.833
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.812
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.896
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.792
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.729
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.708
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.750
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N 0.729
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.771
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.771
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.812
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.792
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.729
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
MDP0000278770 Malus domestica MDP0000278770 N 0.854
MDP0000233925 Malus domestica MDP0000233925 N 0.854
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.792
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.771
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.792
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.812
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.812
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.812
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.771
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.708
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.750
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.729
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.792
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.750
MDP0000221590 Malus domestica MDP0000221590 N 0.792
MDP0000168914 Malus domestica MDP0000168914 N 0.771
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.750
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.729
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.812
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.833
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.750
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.792
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.792
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.792
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.875
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.771
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.771
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.896
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.875
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.896
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.833
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.833
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.854
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.708
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.708
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.875
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.778
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.833
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.875
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.875
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.833
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.812
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.875
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.795
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.875
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.875
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.833
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.917
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.917
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.708
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.708
GLYMA10G10690 Glycine max GLYMA10G10690 N 0.708
Bo4g165540 Brassica oleracea Bo4g165540 N 0.708
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
Bo4g070340 Brassica oleracea Bo4g070340 N 0.723
Bo2g024910 Brassica oleracea Bo2g024910 N 0.750
Bo2g024870 Brassica oleracea Bo2g024870 N 0.708
Bo1g112460 Brassica oleracea Bo1g112460 N 0.896
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.833
AGL61 Arabidopsis thaliana AT2G24840 N 0.729
AGL23 Arabidopsis thaliana AT1G65360 N 0.729
AGL28 Arabidopsis thaliana AT1G01530 N 0.792
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.729
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.875
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.729
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.708
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.812
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.833
Bra038225 Brassica rapa Bra038225 N 0.875
Bra026764 Brassica rapa Bra026764 N 0.708
Bra022434 Brassica rapa Bra022434 N 0.854
Bra020247 Brassica rapa Bra020247 N 0.771
Bra011938 Brassica rapa Bra011938 N 0.729
Bra007829 Brassica rapa Bra007829 N 0.708
Bra002480 Brassica rapa Bra002480 N 0.771
Bo9g142570 Brassica oleracea Bo9g142570 N 0.771
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.833
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.875
mgf022790m Mimulus guttatus mgf022790m N 0.708
Pm021017 Prunus mume Pm021017 N 0.771
Cla006571 Citrullus lanatus Cla006571 N 0.854
Ca_26354 Cicer arietinum Ca_26354 N 0.729
Ca_07607 Cicer arietinum Ca_07607 N 0.729
Ca_04665 Cicer arietinum Ca_04665 N 0.896
Ca_04662 Cicer arietinum Ca_04662 N 0.854
Ca_04660 Cicer arietinum Ca_04660 N 0.938
Ca_04659 Cicer arietinum Ca_04659 N 0.938
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.729
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.792
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.792
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.771
Pm021018 Prunus mume Pm021018 N 0.792
Pm021070 Prunus mume Pm021070 N 0.750
mgf022147m Mimulus guttatus mgf022147m N 0.750
mgf018529m Mimulus guttatus mgf018529m N 0.771
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.854
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.750
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.854
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.729
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
30099.m001672 Ricinus communis 30099.m001672 N 0.833
30099.m001671 Ricinus communis 30099.m001671 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.729
Pm021071 Prunus mume Pm021071 N 0.875
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.792
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.750
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.792
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.729
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.729
PGSC0003DMG400036190 Solanum tuberosum PGSC0003DMG400036190 N 0.702
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.708
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.792
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.875
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.854
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.854
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.875
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.708
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.854
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.771
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.792
TCM_040735 Theobroma cacao TCM_040735 N 0.771
TCM_006323 Theobroma cacao TCM_006323 N 0.812
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.812
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.792
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.771
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.875
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.792
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.771
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.750
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.833
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.812
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.875