CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm004174
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm004174
T257027_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm004174
MADS box
10
58
LIPHEPNRRVTFKKRKASLFRKLTEITTLCGIIACAVVYDPSDSKMDAW
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa014627mg
Prunus persica
PRUPE_ppa014627mg
N
0.958
MDP0000192342
Malus domestica
MDP0000192342
N
0.729
MDP0000186886
Malus domestica
MDP0000186886
N
0.729