evm.TU.contig_34792.1 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_34792.1 T258080_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_34792.1 MADS box 3 50

Links

Other MADS box family TFs
Other Carica papaya TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000388601 Angiostrongylus cantonensis ACAC_0000388601 N 0.000
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.000
ASU_03038 Ascaris suum ASU_03038 N 0.000
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.000
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.000
CBG04789 Caenorhabditis briggsae CBG04789 I 0.000
CBG12152 Caenorhabditis briggsae CBG12152 I 0.000
CBG17366 Caenorhabditis briggsae CBG17366 N 0.000
CBN03149 Caenorhabditis brenneri CBN03149 N 0.000
CBN03769 Caenorhabditis brenneri CBN03769 I 0.000
CBN04619 Caenorhabditis brenneri CBN04619 I 0.000
CBN18264 Caenorhabditis brenneri CBN18264 I 0.000
CRE09011 Caenorhabditis remanei CRE09011 I 0.000
CRE18529 Caenorhabditis remanei CRE18529 I 0.000
CRE27175 Caenorhabditis remanei CRE27175 N 0.000
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.000
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.000
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.000
GPLIN_000989800 Globodera pallida GPLIN_000989800 N 0.000
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.000
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.000
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.000
L889_g10781 Steinernema feltiae L889_g10781 I 0.000
L889_g16048 Steinernema feltiae L889_g16048 N 0.000
L889_g17146 Steinernema feltiae L889_g17146 I 0.000
L892_g10708 Steinernema scapterisci L892_g10708 I 0.000
L892_g8144 Steinernema scapterisci L892_g8144 I 0.000
L892_g8146 Steinernema scapterisci L892_g8146 N 0.000
L893_g2090 Steinernema glaseri L893_g2090 I 0.000
L893_g3450 Steinernema glaseri L893_g3450 N 0.000
L898_g18539 Steinernema monticolum L898_g18539 I 0.000
L898_g28806 Steinernema monticolum L898_g28806 I 0.000
L898_g9580 Steinernema monticolum L898_g9580 I 0.000
PPA08785 Pristionchus pacificus PPA08785 I 0.000
PPA10478 Pristionchus pacificus PPA10478 I 0.000
PPA29361 Pristionchus pacificus PPA29361 I 0.000
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.000
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.000
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.000
scaffold28-EXSNAP2012.86 Pristionchus exspectatus scaffold28-EXSNAP2012.86 N 0.000
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.000
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.000
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.000
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.000
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.000
nhr-205 Caenorhabditis elegans WBGene00011002 N 0.000
nhr-33 Caenorhabditis elegans WBGene00013976 N 0.000