CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Lus10015726.g
(
Linum usitatissimum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Lus10015726.g
T258562_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10015726
MADS box
24
70
KIENDANRYVTFSKRKSGLFKKATELSTLCGAQVAVIIFSGHHKVFS
Links
Other
MADS box
family TFs
Other
Linum usitatissimum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10003481.g
Linum usitatissimum
Lus10003481.g
N
0.915
Lus10037450.g
Linum usitatissimum
Lus10037450.g
N
0.851
Lus10003940.g
Linum usitatissimum
Lus10003940.g
N
0.851
SapurV1A.0175s0160
Salix purpurea
SapurV1A.0175s0160
N
0.766
28348.m000077
Ricinus communis
28348.m000077
N
0.766
SapurV1A.0175s0180
Salix purpurea
SapurV1A.0175s0180
N
0.766
POPTR_0016s12650
Populus trichocarpa
POPTR_0016s12650
N
0.766
cassava44772.m1
Manihot esculenta
cassava44772.m1
N
0.750
POPTR_0016s12640
Populus trichocarpa
POPTR_0016s12640
N
0.745
SapurV1A.0175s0190
Salix purpurea
SapurV1A.0175s0190
N
0.745
cassava27922.m1
Manihot esculenta
cassava27922.m1
N
0.745
SapurV1A.0808s0160
Salix purpurea
SapurV1A.0808s0160
N
0.708
Lus10035456.g
Linum usitatissimum
Lus10035456.g
N
0.708
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.702