CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g043963m.g
(
Citrus sinensis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
orange1.1g043963m.g
T258834_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g043963m
MADS box
10
56
LIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHP
Links
Other
MADS box
family TFs
Other
Citrus sinensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10027125m.g
Citrus clementina
Ciclev10027125m.g
N
0.933
orange1.1g041581m.g
Citrus sinensis
orange1.1g041581m.g
N
0.889
Ciclev10030228m.g
Citrus clementina
Ciclev10030228m.g
N
0.889
Eucgr.J02348
Eucalyptus grandis
Eucgr.J02348
N
0.733