Pavir.J40580 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.J40580 T258965_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J40580.1.p MADS box 78 112

Links

Other MADS box family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ab01824 Panicum virgatum Pavir.Ab01824 N 0.829
GRMZM5G839969 Zea mays GRMZM5G839969 N 0.800
Pavir.J14267 Panicum virgatum Pavir.J14267 N 0.800
GRMZM5G853066 Zea mays GRMZM5G853066 N 0.800
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.771
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.743
Si019470m.g Setaria italica Si019470m.g N 0.743
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.714