CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.1209s0030
(
Salix purpurea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
SapurV1A.1209s0030
T259063_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.1209s0030.1.p
MADS box
10
58
WIVNDSARRASLKKRRVGLLKKVSELTILCGVEAFVIIYSPDDPEPTVW
Links
Other
MADS box
family TFs
Other
Salix purpurea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_023041
Theobroma cacao
TCM_023041
N
0.833
29333.m001063
Ricinus communis
29333.m001063
N
0.818
POPTR_0006s21630
Populus trichocarpa
POPTR_0006s21630
N
0.812
POPTR_0016s06850
Populus trichocarpa
POPTR_0016s06850
N
0.812
TCM_022993
Theobroma cacao
TCM_022993
N
0.795
cassava32147.m1
Manihot esculenta
cassava32147.m1
N
0.792
TCM_023006
Theobroma cacao
TCM_023006
N
0.792
SapurV1A.0980s0020
Salix purpurea
SapurV1A.0980s0020
N
0.771
SapurV1A.0258s0020
Salix purpurea
SapurV1A.0258s0020
N
0.771
orange1.1g038848m.g
Citrus sinensis
orange1.1g038848m.g
N
0.729
Ciclev10013876m.g
Citrus clementina
Ciclev10013876m.g
N
0.729