MATALPHA1 (Saccharomyces cerevisiae)
MATalpha_HMGbox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04769 (MATalpha_HMGbox) IPR006856 YCR040W T259802_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA binding activity, bending and transcription coactivator activity. Involved in regulation of mating-type specific transcription, DNA-templated and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MATALPHA1
M08591_2.00		 Saccharomyces cerevisiae
NTTCNTNATTNGNNNNNCAATN
NATTGNNNNNCNAATNANGAAN		 Misc
DeBoer et al.(2011)
YCR040W_1418		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
YCR040W MATalpha_HMGbox 47 150

Links

Other MATalpha_HMGbox family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action