CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI04G03510
(
Oryza meridionalis
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
OMERI04G03510
T260777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI04G03510.1
MBD
36
74
DLKYYICPLSGTTFTTKSEVLDYLFSEMDQCFLESKNHA
OMERI04G03510.1
MBD
77
225
SNLTRTHEWLPKGWLVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDILAILEFNPEGVPQGWVKEVHYTDPIKIMYSVPRAALYVETGKVTIRAFVQKTSVHEVYSFEKFTHLHESLWKRLELGGTNQLRTRSSKLRKLSLKEEILSDE
OMERI04G03510.2
MBD
64
127
DDVDGRPGWLPDGWIMEVYRDDDGTIYRYYICPLSGTTFTTKSEVLDYLFSEMDQCFLESKNHA
OMERI04G03510.2
MBD
130
277
SNLTRTHEWLPKGWLVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDILAILEFNPEGVPQGWVKEVHYTDPIKIMYSVPRAALYVETGKVTIRAFVQKTSVHEVYSFEKFTHLHESLWKRLELGGTNQLRTRSSKLRKLSLKEEILSD
OMERI04G03510.3
MBD
2
49
EVYRDDDGTIYRYYICPLSGTTFTTKSEVLDYLFSEMDQCFLESKNHA
OMERI04G03510.3
MBD
52
130
SNLTRTHEWLPKGWLVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDILAILEFNPEGVPQGWVKEVHYTDPIKIMYSVP
Links
Other
MBD
family TFs
Other
Oryza meridionalis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_024248
Oryza longistaminata
OLONG_024248
N
0.905
ORUFI04G04290
Oryza rufipogon
ORUFI04G04290
N
0.736