CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS04G0273900
(
Oryza sativa
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
OS04G0273900
T260839_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS04T0273900-00
MBD
35
107
LEEEEERPGWLPDGWIMEVYQGDDGTIYRYYTSPISGLTFTMKSEVLQYLFSGMDERFLESKNCAADNQLIMT
OS04T0273900-00
MBD
102
166
NQLIMTHEWLPKGWIIEVRAGGKNMNKMYKFYVYPPAGVRLFSKEDVLLYINKSEITGFDTNGEC
OS04T0273900-00
MBD
178
281
VEFNPHSLPEGWVKEVVFRKTKTGVIRKDPYFTDPVNNYSFRTRKSAMLYVQTGKVPKRAFIQRTSVHDLYSFEKSADLHESLKKRLDFAARTNRKSRRSLKSK
Links
Other
MBD
family TFs
Other
Oryza sativa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA015448
Oryza indica
BGIOSGA015448
N
0.951
OLONG_021830
Oryza longistaminata
OLONG_021830
N
0.951
ORUFI04G06850
Oryza rufipogon
ORUFI04G06850
N
0.901
ONIVA04G04250
Oryza nivara
ONIVA04G04250
N
0.886
OMERI04G05440
Oryza meridionalis
OMERI04G05440
N
0.886
OBART04G05900
Oryza barthii
OBART04G05900
N
0.886
OB04G14690
Oryza brachyantha
OB04G14690
N
0.733
OB0062G10010
Oryza brachyantha
OB0062G10010
N
0.708