Cmyd_10000498 (Chelonia mydas)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cmyd_10000498 T261253_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mecp2
M00806_2.00
Mus musculus
NNNNNHAHNN

NNDTDNNNNN
PBM
Weirauch et al.(2013)
pTH3054
0.901 0.901
MECP2
M09257_2.00
Homo sapiens
SCCGGRR

YYCCGGS
Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C
0.901 0.901
Mecp2
M09259_2.00
Mus musculus
SCCGGRR

YYCCGGS
Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C
0.901 0.901
MECP2
M11032_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MECP2_01
0.901 0.901
MECP2
M11033_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MECP2_02
0.901 0.901
MECP2
M11034_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MECP2_Q4_01
0.901 0.901
MECP2
M11035_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MECP2_Q4
0.901 0.901
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10000498 MBD 2 72

Links

Other MBD family TFs
Other Chelonia mydas TFs

Invalid Input OrderBy

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action