orange1.1g022412m.g (Citrus sinensis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 orange1.1g022412m.g T261582_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022404m MBD 8 81
orange1.1g022412m MBD 8 81

Links

Other MBD family TFs
Other Citrus sinensis TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.824
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.838
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.730
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.757
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.716
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.716
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.703
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.784
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.703
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.716
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.743
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.784
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.784
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.757
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.730
PK04144.1 Cannabis sativa PK04144.1 N 0.838
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.703
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.784
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.797
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.726
MDP0000574053 Malus domestica MDP0000574053 N 0.811
MDP0000375866 Malus domestica MDP0000375866 N 0.797
MDP0000248422 Malus domestica MDP0000248422 N 0.703
MDP0000152128 Malus domestica MDP0000152128 N 0.811
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.710
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.703
29841.m002855 Ricinus communis 29841.m002855 N 0.703
Pm027560 Prunus mume Pm027560 N 0.797
Cla016961 Citrullus lanatus Cla016961 N 0.730
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.716
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.757
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.757
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.784
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.784
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.797
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.797
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.797
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.703
Bra016665 Brassica rapa Bra016665 N 0.716
Bo8g066360 Brassica oleracea Bo8g066360 N 0.716
MBD10 Arabidopsis thaliana AT1G15340 N 0.703
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.730
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.716
Cla012920 Citrullus lanatus Cla012920 N 0.716
Ca_19192 Cicer arietinum Ca_19192 N 0.743
Ca_06682 Cicer arietinum Ca_06682 N 0.824
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.730
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.716
TCM_038107 Theobroma cacao TCM_038107 N 0.824
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.770
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.743
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.730
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.784
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.810
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.770
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.797