CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT1G61960
(
Arabidopsis thaliana
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
AT1G61960
T262038_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G61960.1
mTERF
88
433
LSLLTSYGFTKSQISSIITIYPRLLALDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEADKSSSYEKLCHSFPQGNKKNKIRNISVLRELGVAQRLLFPLLISDGQPVCGKERFEESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCGLLKHEVLLLLKKHPKCICSSEQKIVNSIETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAFL
Links
Other
mTERF
family TFs
Other
Arabidopsis thaliana
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.22157s0170
Boechera stricta
Bostr.22157s0170
N
0.935
fgenesh1_pm.C_scaffold_2000223
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000223
N
0.917
Cagra.0043s0010
Capsella grandiflora
Cagra.0043s0010
N
0.913
Carubv10020267m.g
Capsella rubella
Carubv10020267m.g
N
0.910
Bostr.22157s0123
Boechera stricta
Bostr.22157s0123
I
0.750
Bostr.22157s0168
Boechera stricta
Bostr.22157s0168
N
0.742
Cagra.0043s0013
Capsella grandiflora
Cagra.0043s0013
N
0.741
AT1G62085
Arabidopsis thaliana
AT1G62085
N
0.727
Bostr.18473s0264
Boechera stricta
Bostr.18473s0264
N
0.719
fgenesh2_kg.5__1064__AT3G46950.1
Arabidopsis lyrata
fgenesh2_kg.5__1064__AT3G46950.1
N
0.713
Carubv10020262m.g
Capsella rubella
Carubv10020262m.g
N
0.704
Bostr.22157s0159
Boechera stricta
Bostr.22157s0159
N
0.701
Cagra.0448s0035
Capsella grandiflora
Cagra.0448s0035
N
0.700
Carubv10018684m.g
Capsella rubella
Carubv10018684m.g
N
0.700