CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.2__2191__AT1G78930.1
(
Arabidopsis lyrata
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
fgenesh2_kg.2__2191__AT1G78930.1
T262690_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.2__2191__AT1G78930.1
mTERF
234
279
GGLDMLGSVDASFRFLIESFPRLLLLSEENDMKPMVEFLESIGIPK
fgenesh2_kg.2__2191__AT1G78930.1
mTERF
269
576
VEFLESIGIPKYCLGKLLLLYPPILLGKTEEIKRRVAAALEKLSVVDKDSGKVLLKYPWILSPSIQENYSHIVSFFYSESVLKMDIDHAIERWPLLLGCSASNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQDFLKVVCFLEDLGFQKEIVGQILCRCPEIFGCSIDKTLQKKLIFLTRYGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFWVLEGRNIECTLQEMLGKNDEEFA
Links
Other
mTERF
family TFs
Other
Arabidopsis lyrata
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G78930
Arabidopsis thaliana
AT1G78930
N
0.933
Carubv10020021m.g
Capsella rubella
Carubv10020021m.g
N
0.912
Cagra.1361s0038
Capsella grandiflora
Cagra.1361s0038
N
0.866
Bostr.20129s0329
Boechera stricta
Bostr.20129s0329
N
0.847