CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0003s18960
(
Populus trichocarpa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
POPTR_0003s18960
T263415_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s18960.1
mTERF
68
356
QIDENNLQKPQSVIQFLKSYDFQDSHIAKLIEKWPAVLRSRTEDNLKPKFDFFIKNGFVGQLLPQLAVLDPVIFRTSLDASIKPCFELLKRFLESNENILAALSRAPFLMSFSFNATVRPNLDLLKKEGVTADRVAKLLLSQPRSLQHSNDRMVYAVTYLKQLGIEPDKTMYIHALTVIARMSESAWRKKIDMFKSVGWTEEEVLWAFKRFPYILLTSEEKIRSMMDFFLNKMKLERQTIVANPALLKYSFGNRILPRCNVLEVLKSKKLIKGDPNIATLLKLSEKDFM
POPTR_0003s18960.2
mTERF
68
356
QIDENNLQKPQSVIQFLKSYDFQDSHIAKLIEKWPAVLRSRTEDNLKPKFDFFIKNGFVGQLLPQLAVLDPVIFRTSLDASIKPCFELLKRFLESNENILAALSRAPFLMSFSFNATVRPNLDLLKKEGVTADRVAKLLLSQPRSLQHSNDRMVYAVTYLKQLGIEPDKTMYIHALTVIARMSESAWRKKIDMFKSVGWTEEEVLWAFKRFPYILLTSEEKIRSMMDFFLNKMKLERQTIVANPALLKYSFGNRILPRCNVLEVLKSKKLIKGDPNIATLLKLSEKDFM
Links
Other
mTERF
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0537s0150
Salix purpurea
SapurV1A.0537s0150
N
0.940
XM_002304784.1
Populus trichocarpa
POPTR_0003s18970
N
0.905
SapurV1A.0537s0140
Salix purpurea
SapurV1A.0537s0140
N
0.901
SapurV1A.0537s0170
Salix purpurea
SapurV1A.0537s0170
N
0.748