CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava22278.valid.m1
(
Manihot esculenta
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
cassava22278.valid.m1
T264342_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava22278.valid.m1
mTERF
195
388
YSTNLVNRLSDFIDFIMIEAAKLKRLPEFESSSFNVRAKTAIEDLNVVPLIRWLKHNGLPYPKIAKLICLSRGNLESITRLAEWLKSIHVKGEFIGVVLTKAGDNILEHSIKELDETVEYLESNGVRRDWMGYIMTRCPQLLSYSMEEVRTRVQFYLDLGMNEKDFGTMVFDYPRVLGYFTLEEMNQKVNYLKE
cassava22278.valid.m1
mTERF
312
620
VEYLESNGVRRDWMGYIMTRCPQLLSYSMEEVRTRVQFYLDLGMNEKDFGTMVFDYPRVLGYFTLEEMNQKVNYLKEFGLSTEDVGKLLAFKPQLMACSIEERWKPLVKYLYYLGISRDGMRRMLTIKPIVFCIDLEETIVPKVRFFKDIGVRDDAIGKMLVKFPPLLTYSLYKKIRPVVIFLMTKAGVSERNIGKVIALGPELLGCSIAHKLDTSVKYLLSLGIRHNQLGEMIADFPMLLRYNIDLLRPKYRYLRRTMVRPLQDLIEFPRFFSYSLDERIIPRHKVLLENRINFKLRYMLATSDEEFQ
Links
Other
mTERF
family TFs
Other
Manihot esculenta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0009s11900
Populus trichocarpa
POPTR_0009s11900
N
0.743
SapurV1A.0037s0440
Salix purpurea
SapurV1A.0037s0440
N
0.727
Ca_15368
Cicer arietinum
Ca_15368
N
0.718