Carubv10026264m.g (Capsella rubella)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Carubv10026264m.g T264671_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10026264m mTERF 175 475

Links

Other mTERF family TFs
Other Capsella rubella TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.6942s0013 Capsella grandiflora Cagra.6942s0013 N 0.990
Bostr.26833s0699 Boechera stricta Bostr.26833s0699 N 0.976
fgenesh2_kg.8__1461__AT5G55580.1 Arabidopsis lyrata fgenesh2_kg.8__1461__AT5G55580.1 N 0.973
MTERF9 Arabidopsis thaliana AT5G55580 N 0.966
Bra028970 Brassica rapa Bra028970 N 0.953
Bo3g021450 Brassica oleracea Bo3g021450 N 0.953
Thhalv10013311m.g Eutrema salsugineum Thhalv10013311m.g N 0.952
evm.TU.supercontig_12.192 Carica papaya evm.TU.supercontig_12.192 N 0.894
TCM_030731 Theobroma cacao TCM_030731 N 0.864
Gorai.013G155100 Gossypium raimondii Gorai.013G155100 N 0.841
cassava31397.valid.m1 Manihot esculenta cassava31397.valid.m1 N 0.833
GLYMA02G46750 Glycine max GLYMA02G46750 N 0.826
GLYMA14G01940 Glycine max GLYMA14G01940 N 0.826
27613.m000644 Ricinus communis 27613.m000644 N 0.824
Eucgr.F03524 Eucalyptus grandis Eucgr.F03524 N 0.823
POPTR_0001s37280 Populus trichocarpa POPTR_0001s37280 N 0.819
SapurV1A.0031s0210 Salix purpurea SapurV1A.0031s0210 N 0.801
Ca_09700 Cicer arietinum Ca_09700 N 0.794
PK04020.1 Cannabis sativa PK04020.1 N 0.782
MTR_5g094610 Medicago truncatula MTR_5g094610 N 0.758
PGSC0003DMG401029813 Solanum tuberosum PGSC0003DMG401029813 N 0.758
mgf013248m Mimulus guttatus mgf013248m N 0.740