CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Da01422
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.Da01422
T265048_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Da01422.1.p
mTERF
84
368
RLKSASNPDAVIALLSGVGLSSADIAKVVVTDPLLLRASPKNIGPRLHALRDRLGLPTPQIARFLGVGSRALRTCDVGPKLEFFISFFGSFEQLLAIIKKSDRILQVDVERVIKPNIALLRQWGLSVRDIAQVCSQNSWLLTYRLDHVKELLLRAEELGVPRSSRMFKYAVSVVSNITKEKAASKLKFLKSTLGCSESEIAIAVPKIPSILALSEELLLRKIQFLIKEVGMKPQHIVERPVLLAHSLEKRLVPRHCVMKFLQAKGLLSSKMGFYSLAQIGEKTFK
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Da01092
Panicum virgatum
Pavir.Da01092
N
0.826
Pavir.Da01094
Panicum virgatum
Pavir.Da01094
N
0.808
Pavir.Da01307
Panicum virgatum
Pavir.Da01307
N
0.801
Pavir.Db01642
Panicum virgatum
Pavir.Db01642
N
0.746
Pavir.J03450
Panicum virgatum
Pavir.J03450
N
0.732