Pavir.J01833 (Panicum virgatum)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Pavir.J01833 T265068_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J01833.1.p mTERF 118 202

Links

Other mTERF family TFs
Other Panicum virgatum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ia00190 Panicum virgatum Pavir.Ia00190 N 0.973
Sb01g001940 Sorghum bicolor Sb01g001940 N 0.932
OPUNC03G37470 Oryza punctata OPUNC03G37470 N 0.919
OS03G0838900 Oryza sativa OS03G0838900 N 0.919
BGIOSGA009486 Oryza indica BGIOSGA009486 N 0.919
ONIVA03G42160 Oryza nivara ONIVA03G42160 N 0.919
ORGLA03G0371400 Oryza glaberrima ORGLA03G0371400 N 0.919
OLONG_012145 Oryza longistaminata OLONG_012145 N 0.919
OBART03G40280 Oryza barthii OBART03G40280 N 0.919
OGLUM03G40150 Oryza glumaepatula OGLUM03G40150 N 0.919
ORUFI03G42080 Oryza rufipogon ORUFI03G42080 N 0.905
OPUNC03G37490 Oryza punctata OPUNC03G37490 N 0.892
MLOC_10423 Hordeum vulgare MLOC_10423 N 0.811
cassava25358.m1 Manihot esculenta cassava25358.m1 N 0.743
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N 0.730
Ca_04306 Cicer arietinum Ca_04306 N 0.730
Aquca_023_00033 Aquilegia coerulea Aquca_023_00033 N 0.726
PRUPE_ppa026991mg Prunus persica PRUPE_ppa026991mg N 0.716
MTR_1g096340 Medicago truncatula MTR_1g096340 N 0.716
mgf002286m Mimulus guttatus mgf002286m N 0.714
PGSC0003DMG400009226 Solanum tuberosum PGSC0003DMG400009226 N 0.704
chr5.LjT08L18.190.nd Lotus japonicus chr5.LjT08L18.190.nd N 0.703
VIT_18s0072g01130 Vitis vinifera VIT_18s0072g01130 N 0.703
Pm022190 Prunus mume Pm022190 N 0.703
gene29104-v1.0-hybrid Fragaria vesca gene29104-v1.0-hybrid N 0.703
29728.m000821 Ricinus communis 29728.m000821 N 0.703