Pavir.J05447 (Panicum virgatum)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Pavir.J05447 T265074_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05447.1.p mTERF 79 125
Pavir.J05447.1.p mTERF 127 436
Pavir.J05447.2.p mTERF 79 125
Pavir.J05447.2.p mTERF 127 436

Links

Other mTERF family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb04g035210 Sorghum bicolor Sb04g035210 N 0.960
Si017041m.g Setaria italica Si017041m.g N 0.960
GRMZM2G000610 Zea mays GRMZM2G000610 N 0.952
OB02G41810 Oryza brachyantha OB02G41810 N 0.927
OPUNC02G32310 Oryza punctata OPUNC02G32310 N 0.915
LPERR02G28820 Leersia perrieri LPERR02G28820 N 0.912
ONIVA02G37110 Oryza nivara ONIVA02G37110 N 0.898
MLOC_69286 Hordeum vulgare MLOC_69286 N 0.898
BRADI3G60150 Brachypodium distachyon BRADI3G60150 N 0.893
Pavir.Aa00275 Panicum virgatum Pavir.Aa00275 N 0.867
OS02G0783100 Oryza sativa OS02G0783100 N 0.867
OMERI02G33050 Oryza meridionalis OMERI02G33050 N 0.837
ORUFI02G36490 Oryza rufipogon ORUFI02G36490 N 0.837
OGLUM02G36180 Oryza glumaepatula OGLUM02G36180 N 0.830
OLONG_008841 Oryza longistaminata OLONG_008841 N 0.814
OGLUM02G36140 Oryza glumaepatula OGLUM02G36140 N 0.799
F775_15519 Aegilops tauschii F775_15519 N 0.797
TRIUR3_08930 Triticum urartu TRIUR3_08930 N 0.782
OMERI02G33020 Oryza meridionalis OMERI02G33020 N 0.706