CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10018313m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10018313m.g
T265196_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10018313m
mTERF
134
239
GLGFKEKVIYMVKQKGDGGKVSFLESLKLSLSSAMYLAHYLSSESLPKLLDKVKYLKEIFFSGSDEKGPVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRGGL
Thhalv10018313m
mTERF
237
308
GGLDMLGSVDASFRFLIESFPRLLLLSEENDMKPLVEFLESIGIPKDCSGKVLLLYPPIMLSKTEEIKRRVA
Thhalv10018313m
mTERF
272
579
VEFLESIGIPKDCSGKVLLLYPPIMLSKTEEIKRRVAASLEKVSAVDKDSGKVLMKYPWILSPSIQEHYSHIVSLLESESVLKMDIDHAIRRWPLLLGCSTSNMKLMVKEFDKLGVRNKRMGKVIPKMPQLLLCKPQEFLKVVSFLEDLGFQKEIVGQILCRCPEIFGCSIDKTLQKKLIFLTRFGVCSTHFPRIIKKYPEFLIYDVEKTVLPRLEYLMDIGISEREIAFMIRKFSPILGYSIDKVLRPKLEFLVNSMEKPVKEVIDYPRYFSYSLEKRIKPRFWVLKGKNIEYTLHEMLGKNDEEFA
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo6g122430
Brassica oleracea
Bo6g122430
N
0.859
Bra035077
Brassica rapa
Bra035077
N
0.821
Bostr.20129s0329
Boechera stricta
Bostr.20129s0329
N
0.727
Cagra.1361s0038
Capsella grandiflora
Cagra.1361s0038
N
0.718
Carubv10020021m.g
Capsella rubella
Carubv10020021m.g
N
0.716