ATMYB57 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Al_scaffold_0003_59 T266105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB57
M01072_2.00
Arabidopsis thaliana
RCCTAAYT

ARTTAGGY
PBM
Sullivan et al.(2014)
pTH9748
0.892 0.989
MYB57
M07059_2.00
Arabidopsis thaliana
YNTACCTAACTHHH

DDDAGTTAGGTANR
Dap-seq
OMalley et al.(2016)
MYB57_col_a
0.892 0.989
MYB57
M07060_2.00
Arabidopsis thaliana
ACCTAAY

RTTAGGT
Dap-seq
OMalley et al.(2016)
MYB57_colamp_a
0.892 0.989
MYB05_ANTMA
M11067_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.797 0.839
MYB24
M02311_2.00
Arabidopsis thaliana
RCCDAMYNN

NNRKTHGGY
PBM
Weirauch et al.(2014)
pTH8662
0.780 0.860
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.704 0.753
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.704 0.753
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.698 0.731
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.698 0.731
GAM1_ORYSI
M11055_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.670 0.645
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.668 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0003_59 Myb 27 74
Al_scaffold_0003_59 Myb 80 125

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

392 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003929 Calypte anna Aan_R003929 I 0.000
Aan_R015392 Calypte anna Aan_R015392 I 0.000
ACEP10867 Atta cephalotes ACEP10867 I 0.000
Afo_R002224 Aptenodytes forsteri Afo_R002224 I 0.000
Afo_R015752 Aptenodytes forsteri Afo_R015752 I 0.000
Alligator_sinensis_CCG001309.1 Alligator sinensis Alligator_sinensis_CCG001309.1 I 0.000
Alligator_sinensis_CCG017491.1 Alligator sinensis Alligator_sinensis_CCG017491.1 I 0.000
Aqu1.219264 Amphimedon queenslandica Aqu1.219264 I 0.000
Brh_R008046 Buceros rhinoceros Brh_R008046 I 0.000
Brh_R012523 Buceros rhinoceros Brh_R012523 I 0.000
CapteG30011 Capitella teleta CapteG30011 I 0.000
Cmyd_10010871 Chelonia mydas Cmyd_10010871 I 0.000
KLF11 Anolis carolinensis ENSACAG00000000128 I 0.000
KLF10 Anolis carolinensis ENSACAG00000009177 I 0.000
ENSAMEG00000014775 Ailuropoda melanoleuca ENSAMEG00000014775 I 0.000
ENSAPLG00000004145 Anas platyrhynchos ENSAPLG00000004145 I 0.000
ENSAPLG00000009146 Anas platyrhynchos ENSAPLG00000009146 I 0.000
KLF10 Bos taurus ENSBTAG00000014396 I 0.000
ENSBTAP00000019142-D1 Bos grunniens ENSBTAP00000019142-D1 I 0.000
KLF10 Canis familiaris ENSCAFG00000000638 I 0.000
KLF11 Canis familiaris ENSCAFG00000003405 I 0.000
KLF10 Callithrix jacchus ENSCJAG00000016069 I 0.000
KLF10 Cavia porcellus ENSCPOG00000011105 I 0.000
ENSCSAG00000011934 Chlorocebus sabaeus ENSCSAG00000011934 I 0.000
ENSCSAVG00000009024 Ciona savignyi ENSCSAVG00000009024 I 0.000
KLF10 Dasypus novemcinctus ENSDNOG00000017020 I 0.000
ENSDORG00000012974 Dipodomys ordii ENSDORG00000012974 I 0.000
Klf10 Dipodomys ordii ENSDORG00000015269 I 0.000
KLF10 Equus caballus ENSECAG00000013153 I 0.000
KLF10 Erinaceus europaeus ENSEEUG00000009077 I 0.000
KLF11 Echinops telfairi ENSETEG00000002915 I 0.000
KLF10 Echinops telfairi ENSETEG00000016283 I 0.000
ENSFALG00000005917 Ficedula albicollis ENSFALG00000005917 I 0.000
KLF10 Felis catus ENSFCAG00000026958 I 0.000
KLF10 Homo sapiens ENSG00000155090 D 0.000
KLF10 Gasterosteus aculeatus ENSGACG00000004632 I 0.000
KLF11 Gasterosteus aculeatus ENSGACG00000008836 I 0.000
ENSGALG00000016063 Gallus gallus ENSGALG00000016063 I 0.000
KLF11 Gallus gallus ENSGALG00000016440 I 0.000
KLF10 Gorilla gorilla ENSGGOG00000015206 I 0.000
ENSLACG00000010260 Latimeria chalumnae ENSLACG00000010260 I 0.000
ENSLACG00000013560 Latimeria chalumnae ENSLACG00000013560 I 0.000
KLF10 Loxodonta africana ENSLAFG00000000037 I 0.000
ENSLOCG00000016837 Lepisosteus oculatus ENSLOCG00000016837 I 0.000
ENSMEUG00000000662 Macropus eugenii ENSMEUG00000000662 I 0.000
KLF10 Meleagris gallopavo ENSMGAG00000012319 I 0.000
KLF11 Meleagris gallopavo ENSMGAG00000014008 I 0.000
ENSMICG00000002285 Microcebus murinus ENSMICG00000002285 I 0.000
KLF11 Myotis lucifugus ENSMLUG00000002295 I 0.000
KLF10 Myotis lucifugus ENSMLUG00000012969 I 0.000
KLF10 Macaca mulatta ENSMMUG00000018815 I 0.000
KLF10 Monodelphis domestica ENSMODG00000005896 I 0.000
ENSMPUG00000013287 Mustela putorius furo ENSMPUG00000013287 I 0.000
ENSMPUG00000015132 Mustela putorius furo ENSMPUG00000015132 I 0.000
Klf10 Mus musculus ENSMUSG00000037465 I 0.000
ENSNLEG00000003646 Nomascus leucogenys ENSNLEG00000003646 I 0.000
KLF10 Ornithorhynchus anatinus ENSOANG00000013800 I 0.000
ENSOARG00000017131 Ovis aries ENSOARG00000017131 I 0.000
KLF10 Oryctolagus cuniculus ENSOCUG00000016141 I 0.000
KLF10 Otolemur garnettii ENSOGAG00000014528 I 0.000
KLF11 Otolemur garnettii ENSOGAG00000026035 I 0.000
ENSONIG00000016428 Oreochromis niloticus ENSONIG00000016428 I 0.000
KLF10 Ochotona princeps ENSOPRG00000006656 I 0.000
ENSP00000285407 Macaca fascicularis ENSP00000285407 I 0.000
ENSPANG00000009227 Papio anubis ENSPANG00000009227 I 0.000
ENSPFOG00000005130 Poecilia formosa ENSPFOG00000005130 I 0.000
ENSPPYG00000018800 Pongo abelii ENSPPYG00000018800 I 0.000
ENSPSIG00000010816 Pelodiscus sinensis ENSPSIG00000010816 I 0.000
ENSPSIG00000012678 Pelodiscus sinensis ENSPSIG00000012678 I 0.000
KLF10 Pan troglodytes ENSPTRG00000020484 I 0.000
KLF10 Pteropus vampyrus ENSPVAG00000013271 I 0.000
Klf10 Rattus norvegicus ENSRNOG00000006118 I 0.000
KLF11 Sorex araneus ENSSARG00000004298 I 0.000
ENSSHAG00000018290 Sarcophilus harrisii ENSSHAG00000018290 I 0.000
KLF10 Sus scrofa ENSSSCG00000027480 I 0.000
ENSSSCG00000027819 Sus scrofa ENSSSCG00000027819 I 0.000
ENSSTOG00000027022 Ictidomys tridecemlineatus ENSSTOG00000027022 I 0.000
KLF11 Tupaia belangeri ENSTBEG00000008268 I 0.000
KLF10 Taeniopygia guttata ENSTGUG00000012120 I 0.000
KLF10 Takifugu rubripes ENSTRUG00000010298 I 0.000
ENSTSYG00000003347 Tarsius syrichta ENSTSYG00000003347 I 0.000
KLF10 Tursiops truncatus ENSTTRG00000000383 I 0.000
ENSXMAG00000010947 Xiphophorus maculatus ENSXMAG00000010947 I 0.000
estExt_fgenesh2_pg.C_5760011 Branchiostoma floridae estExt_fgenesh2_pg.C_5760011 I 0.000
Gfo_R006024 Geospiza fortis Gfo_R006024 I 0.000
KGM_22205 Danaus plexippus KGM_22205 I 0.000
Myotis_brandtii_KLF10_10032162 Myotis brandtii Myotis_brandtii_KLF10_10032162 I 0.000
Myotis_brandtii_KLF11_10020832 Myotis brandtii Myotis_brandtii_KLF11_10020832 I 0.000
NEMVEDRAFT_v1g39461 Nematostella vectensis NEMVEDRAFT_v1g39461 I 0.000
NV23733 Nasonia vitripennis NV23733 I 0.000
Ogr04283 Ophisaurus gracilis Ogr04283 I 0.000
PHUM248360 Pediculus humanus PHUM248360 I 0.000
PPAI003307 Phlebotomus papatasi PPAI003307 I 0.000
Pvit_03838 Pogona vitticeps Pvit_03838 I 0.000
Pvit_14441 Pogona vitticeps Pvit_14441 I 0.000
Sakowv30032823m.g Saccoglossus kowalevskii Sakowv30032823m.g I 0.000
SINV19724 Solenopsis invicta SINV19724 I 0.000
SPU_026418 Strongylocentrotus purpuratus SPU_026418 I 0.000
Tal_R007530 Tyto alba Tal_R007530 I 0.000
Tal_R013154 Tyto alba Tal_R013154 I 0.000
TC014124 Tribolium castaneum TC014124 I 0.000
tetur19g01530 Tetranychus urticae tetur19g01530 I 0.000
klf10.L Xenopus laevis XB-GENE-17335049 I 0.000
klf11.S Xenopus laevis XB-GENE-17345045 I 0.000
klf10 Xenopus tropicalis XB-GENE-854761 I 0.000
klf10.S Xenopus laevis XB-GENE-866571 I 0.000
klf11 Xenopus tropicalis XB-GENE-956858 I 0.000
klf11.L Xenopus laevis XB-GENE-956865 I 0.000