BGIOSGA003347 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA003347 T266742_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYBP_MAIZE
M11057_2.00
Zea mays
ACCWACCHN

NDGGTWGGT
Transfac
Matys et al.(2006)
P$P_01
0.735 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA003347-PA Myb 14 61
BGIOSGA003347-PA Myb 67 88

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_04823 Aegilops tauschii F775_04823 I 0.668
Bra009245 Brassica rapa Bra009245 N 0.693
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I 0.679
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.669
LjSGA_102038.1 Lotus japonicus LjSGA_102038.1 I 0.670
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.683
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.715
cassava3677.m1 Manihot esculenta cassava3677.m1 N 0.686
mgf024704m Mimulus guttatus mgf024704m N 0.687
ORGLA05G0226700 Oryza glaberrima ORGLA05G0226700 N 0.679
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.677
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.677
OLONG_002280 Oryza longistaminata OLONG_002280 I 0.762
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.677
OS01G0305900 Oryza sativa OS01G0305900 I 0.677
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.745
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.675
30076.m004682 Ricinus communis 30076.m004682 I 0.694
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N 0.661
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N 0.662
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.665
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I 0.665
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I 0.670
GRMZM2G016020 Zea mays GRMZM2G016020 I 0.790
GRMZM2G129872 Zea mays GRMZM2G129872 I 0.790
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.735
GRMZM2G000818 Zea mays GRMZM2G000818 I 0.662
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.757