BGIOSGA005828 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA005828 T266768_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RVE1
M00879_2.00
Arabidopsis thaliana
AAATATCT

AGATATTT
PBM
Franco-Zorrilla et al.(2014)
RVE1
0.774 0.804
RVE1
M07128_2.00
Arabidopsis thaliana
NNNWAAATATCTNN

NNAGATATTTWNNN
Dap-seq
OMalley et al.(2016)
RVE1_col_a
0.774 0.804
RVE1
M07129_2.00
Arabidopsis thaliana
NNWAATATCW

WGATATTWNN
Dap-seq
OMalley et al.(2016)
RVE1_colamp_a
0.774 0.804
RVE7
M01069_2.00
Arabidopsis thaliana
NDHRWATCNN

NNGATWYDHN
PBM
Sullivan et al.(2014)
pTH7081
0.771 0.804
RVE7
M02286_2.00
Arabidopsis thaliana
NDARTATCH

DGATAYTHN
PBM
Weirauch et al.(2014)
pTH7277
0.771 0.804
RVE7L
M07071_2.00
Arabidopsis thaliana
NNNNWAAATATCWNN

NNWGATATTTWNNNN
Dap-seq
OMalley et al.(2016)
AT3G10113_col_a
0.771 0.804
RVE7
M07008_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
EPR1_colamp_a
0.771 0.804
RVE7
M07009_2.00
Arabidopsis thaliana
NWAAATATCTHN

NDAGATATTTWN
Dap-seq
OMalley et al.(2016)
EPR1_col
0.771 0.804
PK08316.1
M02350_2.00
Cannabis sativa
NNNRWATCNN

NNGATWYNNN
PBM
Weirauch et al.(2014)
pTH9488
0.766 0.783
LHY
M06997_2.00
Arabidopsis thaliana
NWAAATATCT

AGATATTTWN
Dap-seq
OMalley et al.(2016)
LHY1_col_a
0.753 0.804
LHY
M06998_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
LHY1_colamp_a
0.753 0.804
OS08G0157600
M02330_2.00
Oryza sativa
DNRTATCHN

NDGATAYNH
PBM
Weirauch et al.(2014)
pTH7793
0.744 0.783
CCA1
M00875_2.00
Arabidopsis thaliana
NDNRWATCN

NGATWYNHN
PBM
Franco-Zorrilla et al.(2014)
CCA1
0.698 0.739
CCA1
M11039_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CCA1_Q5
0.698 0.739
RVE5
M01079_2.00
Arabidopsis thaliana
NWAATATCHN

NDGATATTWN
PBM
Sullivan et al.(2014)
pTH7138
0.671 0.630
RVE5
M07100_2.00
Arabidopsis thaliana
NNAAAATATCT

AGATATTTTNN
Dap-seq
OMalley et al.(2016)
At4g01280_col_a
0.671 0.630
RVE5
M07101_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a
0.671 0.630
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA005828-PA Myb 59 104

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
16783_Multiple Saccharomyces bayanus 16783_Multiple I 0.000
23508_YLR278C Saccharomyces mikatae 23508_YLR278C I 0.000
AACERI_AaceriAGR280C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR280C I 0.000
AGOS_AGR280C Ashbya gossypii AGOS_AGR280C I 0.000
CAGL0G09757g Candida glabrata CAGL0G09757g I 0.000
Ecym_3112 Eremothecium cymbalariae Ecym_3112 I 0.000
KAFR_0A04940 Kazachstania africana KAFR_0A04940 I 0.000
KAFR_0G02450 Kazachstania africana KAFR_0G02450 I 0.000
KLTH0G15180g Lachancea thermotolerans KLTH0G15180g I 0.000
KLTH0G15180g Kluyveromyces thermotolerans KLTH0G15180g I 0.000
KNAG_0F03040 Kazachstania naganishii KNAG_0F03040 I 0.000
KNAG_0M00970 Kazachstania naganishii KNAG_0M00970 I 0.000
Kpol_345p3 Vanderwaltozyma polyspora Kpol_345p3 I 0.000
LALA0_S10e04918g Lachancea lanzarotensis LALA0_S10e04918g I 0.000
NCAS_0D02960 Naumovozyma castellii NCAS_0D02960 I 0.000
NCAS_0F00370 Naumovozyma castellii NCAS_0F00370 I 0.000
NDAI_0D02730 Naumovozyma dairenensis NDAI_0D02730 I 0.000
NDAI_0I01940 Naumovozyma dairenensis NDAI_0I01940 I 0.000
SAKL0A08074g Lachancea kluyveri SAKL0A08074g I 0.000
Scas_Contig526.3 Saccharomyces castellii Scas_Contig526.3 I 0.000
Scas_Contig590.2 Saccharomyces castellii Scas_Contig590.2 I 0.000
SU7_2306 Saccharomyces arboricola SU7_2306 I 0.000
TBLA_0A09760 Tetrapisispora blattae TBLA_0A09760 I 0.000
TBLA_0E01110 Tetrapisispora blattae TBLA_0E01110 I 0.000
TPHA_0F02630 Tetrapisispora phaffii TPHA_0F02630 I 0.000
TPHA_0K01100 Tetrapisispora phaffii TPHA_0K01100 I 0.000
YLR278C Saccharomyces cerevisiae YLR278C D 0.000
ZBAI_03663 Zygosaccharomyces bailii ZBAI_03663 I 0.000
ZBAI_09347 Zygosaccharomyces bailii ZBAI_09347 I 0.000
ZYRO0D14432g Zygosaccharomyces rouxii ZYRO0D14432g I 0.000