BGIOSGA022174 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA022174 T266892_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.724 0.774
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.723 0.763
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.723 0.763
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH

DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.723 0.785
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY

RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.723 0.785
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.703 0.763
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.703 0.763
MYB106
M11040_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.686 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA022174-PA Myb 15 62
BGIOSGA022174-PA Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

487 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA010468 Oryza indica BGIOSGA010468 I 0.000
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.000
OB03G31780 Oryza brachyantha OB03G31780 I 0.000
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.000
OBART03G22570 Oryza barthii OBART03G22570 I 0.000
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I 0.000
OLONG_027628 Oryza longistaminata OLONG_027628 I 0.000
Ca_05641 Cicer arietinum Ca_05641 I 0.000
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I 0.000
OS12G0583700 Oryza sativa OS12G0583700 I 0.000
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I 0.000
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.000
OS03G0437200 Oryza sativa OS03G0437200 I 0.000
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.000
Bo7g117320 Brassica oleracea Bo7g117320 I 0.000
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.000
Cagra.2350s0072 Capsella grandiflora Cagra.2350s0072 I 0.000
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.000
GSMUA_Achr6G34890_001 Musa acuminata GSMUA_Achr6G34890_001 I 0.000
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.000
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.000
OS11G0340477 Oryza sativa OS11G0340477 N 0.000
PDK_20s1446781g002 Phoenix dactylifera PDK_20s1446781g002 N 0.000
Si037516m.g Setaria italica Si037516m.g N 0.000
Sb01g031920 Sorghum bicolor Sb01g031920 N 0.000
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N 0.000
Si037343m.g Setaria italica Si037343m.g N 0.000
Traes_2DS_11ADF414D Triticum aestivum Traes_2DS_11ADF414D N 0.000
OS03G0437100 Oryza sativa OS03G0437100 N 0.000
BGIOSGA010470 Oryza indica BGIOSGA010470 N 0.000
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N 0.000
F775_12743 Aegilops tauschii F775_12743 N 0.000
GRMZM5G883760 Zea mays GRMZM5G883760 N 0.000
GSMUA_Achr10G31400_001 Musa acuminata GSMUA_Achr10G31400_001 N 0.000
GSMUA_Achr7G20260_001 Musa acuminata GSMUA_Achr7G20260_001 N 0.000
LPERR03G19190 Leersia perrieri LPERR03G19190 N 0.000
OB03G31790 Oryza brachyantha OB03G31790 N 0.000
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N 0.000
OBART03G22560 Oryza barthii OBART03G22560 N 0.000
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N 0.000
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N 0.000
BGIOSGA010469 Oryza indica BGIOSGA010469 N 0.000