Bo7g116160 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g116160 T267529_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.697 0.677
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.697 0.677
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.668 0.656
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.668 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g116160.1 Myb 18 64
Bo7g116160.1 Myb 70 115

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra037004 Brassica rapa Bra037004 N 0.836
30137.m000436 Ricinus communis 30137.m000436 I 0.753
cassava5849.m1 Manihot esculenta cassava5849.m1 I 0.753
POPTR_0007s04140 Populus trichocarpa POPTR_0007s04140 I 0.748
SapurV1A.0171s0440 Salix purpurea SapurV1A.0171s0440 I 0.748
POPTR_0005s06410 Populus trichocarpa POPTR_0005s06410 I 0.746
SapurV1A.0916s0130 Salix purpurea SapurV1A.0916s0130 I 0.732
SapurV1A.1092s0010 Salix purpurea SapurV1A.1092s0010 I 0.732
PDK_20s1366461g001 Phoenix dactylifera PDK_20s1366461g001 I 0.724
GSMUA_Achr9G08480_001 Musa acuminata GSMUA_Achr9G08480_001 I 0.720
Cucsa.016540 Cucumis sativus Cucsa.016540 I 0.718
ATMYB69 Vitis vinifera VIT_04s0044g01380 I 0.717
Cagra.4894s0009 Capsella grandiflora Cagra.4894s0009 I 0.710
Bostr.10273s0016 Boechera stricta Bostr.10273s0016 I 0.710
Bo6g116800 Brassica oleracea Bo6g116800 I 0.710
ATMYB54 Arabidopsis thaliana AT1G73410 I 0.710
Bra015992 Brassica rapa Bra015992 I 0.710
Carubv10021434m.g Capsella rubella Carubv10021434m.g I 0.710
ATMYB54 Arabidopsis lyrata Al_scaffold_0002_2037 I 0.710
Bo2g080540 Brassica oleracea Bo2g080540 I 0.710
TCM_001496 Theobroma cacao TCM_001496 I 0.710
Bra008096 Brassica rapa Bra008096 I 0.710
Thhalv10019669m.g Eutrema salsugineum Thhalv10019669m.g I 0.710
Carubv10006783m.g Capsella rubella Carubv10006783m.g I 0.709
Cagra.0844s0037 Capsella grandiflora Cagra.0844s0037 I 0.709
Bo1g008140 Brassica oleracea Bo1g008140 I 0.709
Bra011441 Brassica rapa Bra011441 I 0.709
ATMYB69 Arabidopsis thaliana AT4G33450 I 0.709
ATMYB69 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000654 I 0.709
Thhalv10008597m.g Eutrema salsugineum Thhalv10008597m.g I 0.706
GSMUA_Achr3G16490_001 Musa acuminata GSMUA_Achr3G16490_001 I 0.706
SapurV1A.3733s0010 Salix purpurea SapurV1A.3733s0010 I 0.705
SapurV1A.1664s0020 Salix purpurea SapurV1A.1664s0020 I 0.705
Thhalv10026063m.g Eutrema salsugineum Thhalv10026063m.g I 0.700
Bostr.7867s1191 Boechera stricta Bostr.7867s1191 I 0.700
mgf018311m Mimulus guttatus mgf018311m I 0.700
Bo8g104600 Brassica oleracea Bo8g104600 I 0.697
Cagra.2175s0026 Capsella grandiflora Cagra.2175s0026 I 0.697
ATMYB52 Arabidopsis lyrata scaffold_102001.1 I 0.697
Bra031008 Brassica rapa Bra031008 I 0.697
MYB52 Arabidopsis thaliana AT1G17950 D 0.697
Carubv10012605m.g Capsella rubella Carubv10012605m.g I 0.697
PDK_20s1619721g001 Phoenix dactylifera PDK_20s1619721g001 I 0.696
PDK_20s1649141g001 Phoenix dactylifera PDK_20s1649141g001 I 0.694
GSMUA_Achr9G15750_001 Musa acuminata GSMUA_Achr9G15750_001 I 0.694
PK01212.1 Cannabis sativa PK01212.1 I 0.691
AMTR_s00186p00015620 Amborella trichopoda AMTR_s00186p00015620 I 0.688
SELMODRAFT_8484 Selaginella moellendorffii SELMODRAFT_8484 I 0.688
SELMODRAFT_38644 Selaginella moellendorffii SELMODRAFT_38644 I 0.688
e_gw1.91.11.1 Physcomitrella patens e_gw1.91.11.1 I 0.688
gw1.200.30.1 Physcomitrella patens gw1.200.30.1 I 0.688
gw1.76.8.1 Physcomitrella patens gw1.76.8.1 I 0.688
gw1.2.29.1 Physcomitrella patens gw1.2.29.1 I 0.687
Sb03g010970 Sorghum bicolor Sb03g010970 I 0.687
MDP0000878006 Malus domestica MDP0000878006 I 0.686
MDP0000172476 Malus domestica MDP0000172476 I 0.686
Solyc04g064540.2 Solanum lycopersicum Solyc04g064540.2 I 0.685
PGSC0003DMG400024822 Solanum tuberosum PGSC0003DMG400024822 I 0.685
POPTR_0005s20870 Populus trichocarpa POPTR_0005s20870 I 0.682
Bo3g170700 Brassica oleracea Bo3g170700 I 0.679
Bo8g067590 Brassica oleracea Bo8g067590 I 0.677
cassava12378.valid.m1 Manihot esculenta cassava12378.valid.m1 I 0.677
GSMUA_Achr3G07700_001 Musa acuminata GSMUA_Achr3G07700_001 I 0.676
Sb03g010960 Sorghum bicolor Sb03g010960 I 0.675
PRUPE_ppa006434mg Prunus persica PRUPE_ppa006434mg I 0.675
cassava25953.m1 Manihot esculenta cassava25953.m1 I 0.675
GRMZM2G111731 Zea mays GRMZM2G111731 I 0.675
PK28773.1 Cannabis sativa PK28773.1 I 0.675
AMTR_s00119p00105590 Amborella trichopoda AMTR_s00119p00105590 I 0.675
GLYMA03G00980 Glycine max GLYMA03G00980 I 0.675
Pm025457 Prunus mume Pm025457 I 0.675
Pavir.Ea01097 Panicum virgatum Pavir.Ea01097 I 0.675
GRMZM2G312419 Zea mays GRMZM2G312419 I 0.675
GSMUA_Achr10G12830_001 Musa acuminata GSMUA_Achr10G12830_001 I 0.675
MDP0000755899 Malus domestica MDP0000755899 I 0.675
gene29254-v1.0-hybrid Fragaria vesca gene29254-v1.0-hybrid I 0.675
evm.TU.supercontig_73.4 Carica papaya evm.TU.supercontig_73.4 I 0.675
GSMUA_Achr9G04990_001 Musa acuminata GSMUA_Achr9G04990_001 I 0.675
POPTR_0013s06320 Populus trichocarpa POPTR_0013s06320 I 0.675
Ciclev10020631m.g Citrus clementina Ciclev10020631m.g I 0.675
GSMUA_Achr6G32250_001 Musa acuminata GSMUA_Achr6G32250_001 I 0.675
Gorai.009G251700 Gossypium raimondii Gorai.009G251700 I 0.673
Pm022705 Prunus mume Pm022705 I 0.673
MDP0000291518 Malus domestica MDP0000291518 I 0.673
Ciclev10001803m.g Citrus clementina Ciclev10001803m.g I 0.673
MDP0000852158 Malus domestica MDP0000852158 I 0.673
orange1.1g020106m.g Citrus sinensis orange1.1g020106m.g I 0.673
Pavir.J16832 Panicum virgatum Pavir.J16832 I 0.673
Gorai.013G106600 Gossypium raimondii Gorai.013G106600 I 0.673
TCM_035359 Theobroma cacao TCM_035359 I 0.673
PRUPE_ppa016398mg Prunus persica PRUPE_ppa016398mg I 0.673
GLYMA06G12691 Glycine max GLYMA06G12691 I 0.673
GLYMA04G42110 Glycine max GLYMA04G42110 I 0.673
MTR_3g089045 Medicago truncatula MTR_3g089045 I 0.673
chr2.CM0641.440.nd Lotus japonicus chr2.CM0641.440.nd I 0.672
GLYMA02G12105 Glycine max GLYMA02G12105 I 0.672
MDP0000136541 Malus domestica MDP0000136541 I 0.672
ONIVA01G13400 Oryza nivara ONIVA01G13400 I 0.672
cassava3020.m1 Manihot esculenta cassava3020.m1 I 0.672
GLYMA01G05980 Glycine max GLYMA01G05980 I 0.672
MDP0000146675 Malus domestica MDP0000146675 I 0.672
OGLUM01G12520 Oryza glumaepatula OGLUM01G12520 I 0.672
OMERI01G10960 Oryza meridionalis OMERI01G10960 I 0.672
OPUNC01G10870 Oryza punctata OPUNC01G10870 I 0.672
evm.TU.contig_27928.1 Carica papaya evm.TU.contig_27928.1 I 0.672
ORUFI01G12050 Oryza rufipogon ORUFI01G12050 I 0.672
OS01G0274800 Oryza sativa OS01G0274800 I 0.672
Bostr.7128s0403 Boechera stricta Bostr.7128s0403 I 0.672
PK20989.1 Cannabis sativa PK20989.1 I 0.672
MTR_5g041570 Medicago truncatula MTR_5g041570 I 0.672
MTR_4g082040 Medicago truncatula MTR_4g082040 I 0.672
Ca_16374 Cicer arietinum Ca_16374 I 0.672
GLYMA20G04511 Glycine max GLYMA20G04511 I 0.672
GLYMA07G35581 Glycine max GLYMA07G35581 I 0.672
Pavir.Hb01200 Panicum virgatum Pavir.Hb01200 I 0.672
evm.TU.supercontig_7.125 Carica papaya evm.TU.supercontig_7.125 I 0.671
GSMUA_Achr10G05080_001 Musa acuminata GSMUA_Achr10G05080_001 I 0.671
POPTR_0015s05130 Populus trichocarpa POPTR_0015s05130 I 0.670
30000.m000380 Ricinus communis 30000.m000380 I 0.670
SELMODRAFT_6100 Selaginella moellendorffii SELMODRAFT_6100 I 0.670
Si011791m.g Setaria italica Si011791m.g I 0.670
SELMODRAFT_6091 Selaginella moellendorffii SELMODRAFT_6091 I 0.670
POPTR_0019s05740 Populus trichocarpa POPTR_0019s05740 I 0.670
SapurV1A.0074s0390 Salix purpurea SapurV1A.0074s0390 I 0.670
Bra034565 Brassica rapa Bra034565 I 0.669
Solyc10g081320.1 Solanum lycopersicum Solyc10g081320.1 I 0.669
Si026751m.g Setaria italica Si026751m.g I 0.669
Pavir.J04678 Panicum virgatum Pavir.J04678 I 0.669
Cucsa.284980 Cucumis sativus Cucsa.284980 I 0.669
PGSC0003DMG400028119 Solanum tuberosum PGSC0003DMG400028119 I 0.669
Cla010359 Citrullus lanatus Cla010359 I 0.669
Gorai.007G002200 Gossypium raimondii Gorai.007G002200 I 0.669
Thhalv10014113m.g Eutrema salsugineum Thhalv10014113m.g I 0.668
LPERR01G10360 Leersia perrieri LPERR01G10360 I 0.668
AtMYB56 Arabidopsis lyrata fgenesh2_kg.6__1780__AT5G17800.1 I 0.668
Cagra.6254s0026 Capsella grandiflora Cagra.6254s0026 I 0.668
MYB56 Arabidopsis thaliana AT5G17800 D 0.668
Cla000326 Citrullus lanatus Cla000326 I 0.668
Bostr.26527s0427 Boechera stricta Bostr.26527s0427 I 0.668
Bra016575 Brassica rapa Bra016575 I 0.668
e_gw1.219.38.1 Physcomitrella patens e_gw1.219.38.1 I 0.668
Carubv10001376m.g Capsella rubella Carubv10001376m.g I 0.668
28838.m000246 Ricinus communis 28838.m000246 I 0.667
cassava9262.m1 Manihot esculenta cassava9262.m1 I 0.667
PRUPE_ppa021779mg Prunus persica PRUPE_ppa021779mg I 0.667
orange1.1g025697m.g Citrus sinensis orange1.1g025697m.g I 0.667
SapurV1A.1601s0030 Salix purpurea SapurV1A.1601s0030 I 0.667
TCM_013357 Theobroma cacao TCM_013357 I 0.667
SapurV1A.0118s0380 Salix purpurea SapurV1A.0118s0380 I 0.667
ATMYB52 Vitis vinifera VIT_17s0000g01890 I 0.667
Cucsa.077160 Cucumis sativus Cucsa.077160 I 0.667
Cla014084 Citrullus lanatus Cla014084 I 0.667
MDP0000265114 Malus domestica MDP0000265114 I 0.667
SapurV1A.2371s0030 Salix purpurea SapurV1A.2371s0030 I 0.667
gene09311-v1.0-hybrid Fragaria vesca gene09311-v1.0-hybrid I 0.667
PK17670.1 Cannabis sativa PK17670.1 I 0.667
Ciclev10021859m.g Citrus clementina Ciclev10021859m.g I 0.667
POPTR_0007s01430 Populus trichocarpa POPTR_0007s01430 I 0.667
SapurV1A.1660s0020 Salix purpurea SapurV1A.1660s0020 I 0.666
Pavir.Fa00885 Panicum virgatum Pavir.Fa00885 I 0.666
mgf006675m Mimulus guttatus mgf006675m I 0.666
SapurV1A.1416s0010 Salix purpurea SapurV1A.1416s0010 I 0.666
Pavir.Fb01599 Panicum virgatum Pavir.Fb01599 I 0.666
LPERR08G13020 Leersia perrieri LPERR08G13020 I 0.666
BRADI3G36740 Brachypodium distachyon BRADI3G36740 I 0.666
GRMZM2G428555 Zea mays GRMZM2G428555 I 0.666
OB08G23250 Oryza brachyantha OB08G23250 I 0.666
Sb07g021280 Sorghum bicolor Sb07g021280 I 0.666
Pavir.J21755 Panicum virgatum Pavir.J21755 I 0.665
Si005038m.g Setaria italica Si005038m.g I 0.665
Si004691m.g Setaria italica Si004691m.g I 0.665
Bra006422 Brassica rapa Bra006422 I 0.664
Bo3g012780 Brassica oleracea Bo3g012780 I 0.664
Aquca_022_00293 Aquilegia coerulea Aquca_022_00293 I 0.664
evm.TU.supercontig_480.4 Carica papaya evm.TU.supercontig_480.4 I 0.663
PGSC0003DMG400031044 Solanum tuberosum PGSC0003DMG400031044 I 0.663
Sb05g009460 Sorghum bicolor Sb05g009460 I 0.663
Gorai.008G293100 Gossypium raimondii Gorai.008G293100 I 0.663
Lus10031326.g Linum usitatissimum Lus10031326.g I 0.663
Lus10031900.g Linum usitatissimum Lus10031900.g I 0.663
OS08G0435700 Oryza sativa OS08G0435700 I 0.662
BGIOSGA028724 Oryza indica BGIOSGA028724 I 0.662
ORUFI08G17710 Oryza rufipogon ORUFI08G17710 I 0.662
Ca_03919 Cicer arietinum Ca_03919 I 0.662
OPUNC08G13850 Oryza punctata OPUNC08G13850 I 0.662
OMERI08G13100 Oryza meridionalis OMERI08G13100 I 0.662
OGLUM08G16550 Oryza glumaepatula OGLUM08G16550 I 0.662
ORGLA08G0138700 Oryza glaberrima ORGLA08G0138700 I 0.662
ONIVA08G17040 Oryza nivara ONIVA08G17040 I 0.662
Pavir.J31094 Panicum virgatum Pavir.J31094 I 0.662
OBART08G15790 Oryza barthii OBART08G15790 I 0.662
POPTR_0012s03650 Populus trichocarpa POPTR_0012s03650 I 0.661