CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g181820
(
Brassica oleracea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bo9g181820
T267661_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g181820.1
Myb
112
172
TGRWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLY
Bo9g181820.1
Myb
403
464
RCWDEQEIIKLREIRSSMDSAFQEVLEGSSDEFLWEEVAAKLTQLGFDQRSALICKEKWEQI
Links
Other
Myb/SANT
family TFs
Other
Brassica oleracea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10013048m.g
Eutrema salsugineum
Thhalv10013048m.g
N
0.850
Cagra.0154s0034
Capsella grandiflora
Cagra.0154s0034
N
0.844
Carubv10000532m.g
Capsella rubella
Carubv10000532m.g
N
0.844
PTL
Arabidopsis thaliana
AT5G03680
N
0.823
Bra005777
Brassica rapa
Bra005777
N
0.734
TCM_022457
Theobroma cacao
TCM_022457
N
0.709
29092.m000461
Ricinus communis
29092.m000461
N
0.697
evm.TU.supercontig_5.72
Carica papaya
evm.TU.supercontig_5.72
N
0.673