Bra017218 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra017218 T267896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.736 0.796
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.736 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra017218.1-P Myb 14 62
Bra017218.1-P Myb 68 113

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

438 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.000
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.000
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.000
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.000
L898_g30390 Steinernema monticolum L898_g30390 I 0.000
L898_g2764 Steinernema monticolum L898_g2764 I 0.000
L898_g26357 Steinernema monticolum L898_g26357 I 0.000
L898_g23058 Steinernema monticolum L898_g23058 I 0.000
L898_g22454 Steinernema monticolum L898_g22454 I 0.000
L898_g11608 Steinernema monticolum L898_g11608 I 0.000
L893_g3010 Steinernema glaseri L893_g3010 I 0.000
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.000
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.000
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.000
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.000
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.000
NECAME_02375 Necator americanus NECAME_02375 I 0.000
NECAME_00872 Necator americanus NECAME_00872 I 0.000
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.000
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.000
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.000
L893_g263 Steinernema glaseri L893_g263 I 0.000
L893_g25227 Steinernema glaseri L893_g25227 I 0.000
L889_g17247 Steinernema feltiae L889_g17247 I 0.000
L889_g11570 Steinernema feltiae L889_g11570 I 0.000
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.000
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.000
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.000
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.000
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.000
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.000
L889_g29879 Steinernema feltiae L889_g29879 I 0.000
L889_g31970 Steinernema feltiae L889_g31970 I 0.000
L889_g7780 Steinernema feltiae L889_g7780 I 0.000
L893_g22683 Steinernema glaseri L893_g22683 I 0.000
L893_g21283 Steinernema glaseri L893_g21283 I 0.000
L893_g15045 Steinernema glaseri L893_g15045 I 0.000
L893_g13285 Steinernema glaseri L893_g13285 I 0.000
L892_g8671 Steinernema scapterisci L892_g8671 I 0.000
L892_g4134 Steinernema scapterisci L892_g4134 I 0.000
L892_g2422 Steinernema scapterisci L892_g2422 I 0.000
L889_g8914 Steinernema feltiae L889_g8914 I 0.000
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.000
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.000
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.000
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.000
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I 0.000
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.000
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.000
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.000
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.000
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.000
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.000
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.000
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.000
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.000
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.000
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.000
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.000
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.000
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.000
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.000
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.000
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.000
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.000
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.000
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.000
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.000
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I 0.000
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.000
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.000
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.000
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.000
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.000
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.000
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.000
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.000
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.000
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.000
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.000
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.000
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.000
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.000
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.000
Bm5319 Brugia malayi Bm5319 I 0.000
LOAG_08615 Loa loa LOAG_08615 I 0.000
LOAG_00300 Loa loa LOAG_00300 I 0.000
CRE26982 Caenorhabditis remanei CRE26982 I 0.000
CRE26981 Caenorhabditis remanei CRE26981 I 0.000
CRE10779 Caenorhabditis remanei CRE10779 I 0.000
CRE09416 Caenorhabditis remanei CRE09416 I 0.000
CRE08259 Caenorhabditis remanei CRE08259 I 0.000
CRE07033 Caenorhabditis remanei CRE07033 I 0.000
LOAG_08636 Loa loa LOAG_08636 I 0.000
PPA16374 Pristionchus pacificus PPA16374 I 0.000
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.000
Bm4980 Brugia malayi Bm4980 I 0.000
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.000
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.000
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.000
PPA22443 Pristionchus pacificus PPA22443 I 0.000
PPA21285 Pristionchus pacificus PPA21285 I 0.000
PPA20196 Pristionchus pacificus PPA20196 I 0.000
CRE03310 Caenorhabditis remanei CRE03310 I 0.000
CRE00809 Caenorhabditis remanei CRE00809 I 0.000
CBN11572 Caenorhabditis brenneri CBN11572 I 0.000
CBG23319 Caenorhabditis briggsae CBG23319 I 0.000
CBG23318 Caenorhabditis briggsae CBG23318 I 0.000
CBG22587 Caenorhabditis briggsae CBG22587 I 0.000
CBG16594 Caenorhabditis briggsae CBG16594 I 0.000
CBG14485 Caenorhabditis briggsae CBG14485 I 0.000
CBG03844 Caenorhabditis briggsae CBG03844 I 0.000
CBG01866 Caenorhabditis briggsae CBG01866 I 0.000
CBN18198 Caenorhabditis brenneri CBN18198 I 0.000
CBN19235 Caenorhabditis brenneri CBN19235 I 0.000
CJA16040 Caenorhabditis japonica CJA16040 I 0.000
CJA14248 Caenorhabditis japonica CJA14248 I 0.000
CJA13458 Caenorhabditis japonica CJA13458 I 0.000
CJA02727 Caenorhabditis japonica CJA02727 I 0.000
CJA01292 Caenorhabditis japonica CJA01292 I 0.000
CBN30215 Caenorhabditis brenneri CBN30215 I 0.000
CBN20749 Caenorhabditis brenneri CBN20749 I 0.000
CBN20518 Caenorhabditis brenneri CBN20518 I 0.000
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.000
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.000
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.000
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.000
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.000
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.000
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.000
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.000
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.000
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.000
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.000
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.000
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.000
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.000
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.000
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.000
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.000
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.000
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.000
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.000
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.000
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.000
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.000
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.000
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.000
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.000
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.000
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.000
Minc17538 Meloidogyne incognita Minc17538 I 0.000
Minc13747 Meloidogyne incognita Minc13747 I 0.000
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.000
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.000
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.000
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.000
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.000
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.000
ASU_13587 Ascaris suum ASU_13587 I 0.000
ASU_12501 Ascaris suum ASU_12501 I 0.000
ASU_03870 Ascaris suum ASU_03870 I 0.000
ASU_00971 Ascaris suum ASU_00971 I 0.000
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.000
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.000