Bra025361 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra025361 T267984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH

DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.909 1.000
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY

RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.909 1.000
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH

DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.886 0.935
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN

NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.886 0.935
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN

NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.872 0.925
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN

NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.870 0.946
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH

DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.870 0.946
ATY13
M07035_2.00
Arabidopsis thaliana
HAMCHMCCAMCHAHH

DDTDGKTGGKDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_col_a
0.855 0.925
ATY13
M07036_2.00
Arabidopsis thaliana
HAMCHHCCAACHAHH

DDTDGTTGGDDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_colamp_a
0.855 0.925
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025361.1-P Myb 14 61
Bra025361.1-P Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

Invalid Input OrderBy

310 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action