Bra025914 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra025914 T267995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RVE7
M01069_2.00
Arabidopsis thaliana
NDHRWATCNN

NNGATWYDHN
PBM
Sullivan et al.(2014)
pTH7081
0.876 0.891
RVE7
M02286_2.00
Arabidopsis thaliana
NDARTATCH

DGATAYTHN
PBM
Weirauch et al.(2014)
pTH7277
0.876 0.891
RVE7L
M07071_2.00
Arabidopsis thaliana
NNNNWAAATATCWNN

NNWGATATTTWNNNN
Dap-seq
OMalley et al.(2016)
AT3G10113_col_a
0.876 0.891
RVE7
M07008_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
EPR1_colamp_a
0.876 0.891
RVE7
M07009_2.00
Arabidopsis thaliana
NWAAATATCTHN

NDAGATATTTWN
Dap-seq
OMalley et al.(2016)
EPR1_col
0.876 0.891
LHY
M06997_2.00
Arabidopsis thaliana
NWAAATATCT

AGATATTTWN
Dap-seq
OMalley et al.(2016)
LHY1_col_a
0.833 0.804
LHY
M06998_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
LHY1_colamp_a
0.833 0.804
OS08G0157600
M02330_2.00
Oryza sativa
DNRTATCHN

NDGATAYNH
PBM
Weirauch et al.(2014)
pTH7793
0.805 0.783
PK08316.1
M02350_2.00
Cannabis sativa
NNNRWATCNN

NNGATWYNNN
PBM
Weirauch et al.(2014)
pTH9488
0.778 0.761
CCA1
M00875_2.00
Arabidopsis thaliana
NDNRWATCN

NGATWYNHN
PBM
Franco-Zorrilla et al.(2014)
CCA1
0.760 0.717
CCA1
M11039_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CCA1_Q5
0.760 0.717
RVE1
M00879_2.00
Arabidopsis thaliana
AAATATCT

AGATATTT
PBM
Franco-Zorrilla et al.(2014)
RVE1
0.718 0.696
RVE1
M07128_2.00
Arabidopsis thaliana
NNNWAAATATCTNN

NNAGATATTTWNNN
Dap-seq
OMalley et al.(2016)
RVE1_col_a
0.718 0.696
RVE1
M07129_2.00
Arabidopsis thaliana
NNWAATATCW

WGATATTWNN
Dap-seq
OMalley et al.(2016)
RVE1_colamp_a
0.718 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025914.1-P Myb 50 95

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CaO19.1168 Candida albicans CaO19.1168 I 0.000
CaO19.8761 Candida albicans CaO19.8761 I 0.000
CD36_10810 Candida dubliniensis CD36_10810 I 0.000
CLUG_05915 Candida lusitaniae CLUG_05915 N 0.000
G210_5732 Candida maltosa G210_5732 I 0.000
CANTEDRAFT_115466 Candida tenuis CANTEDRAFT_115466 N 0.000
CTRG_03493 Candida tropicalis CTRG_03493 I 0.000
A1O1_01627 Capronia coronata A1O1_01627 N 0.000
A1O3_08442 Capronia epimyces A1O3_08442 N 0.000
PV04_10066 Capronia semiimmersa PV04_10066 I 0.000
G647_01190 Cladophialophora carrionii G647_01190 I 0.000
A1O7_01132 Cladophialophora yegresii A1O7_01132 I 0.000
CLUG_05915 Clavispora lusitaniae CLUG_05915 N 0.000
CFIO01_10586 Colletotrichum fioriniae CFIO01_10586 N 0.000
GLRG_03456 Colletotrichum graminicola GLRG_03456 N 0.000
CH063_12034 Colletotrichum higginsianum CH063_12034 N 0.000
CSUB01_04728 Colletotrichum sublineola CSUB01_04728 N 0.000
estExt_fgenesh1_pg.C_10320 Cryphonectria parasitica estExt_fgenesh1_pg.C_10320 N 0.000
Z517_01830 Fonsecaea pedrosoi Z517_01830 I 0.000
FFUJ_07470 Fusarium fujikuroi FFUJ_07470 I 0.000
FGRRES_10069 Fusarium graminearum FGRRES_10069 I 0.000
FPSE_00487 Fusarium pseudograminearum FPSE_00487 I 0.000
NechaG37042 Fusarium solani NechaG37042 N 0.000
FVEG_02704 Fusarium verticillioides FVEG_02704 I 0.000
SAKL0D14916g Lachancea kluyveri SAKL0D14916g I 0.000
estExt_fgenesh1_pg.C_chr_1.20230 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20230 N 0.000
PICST_66647 Scheffersomyces stipitis PICST_66647 N 0.000
SPBR_06562 Sporothrix brasiliensis SPBR_06562 N 0.000
HMPREF1624_00136 Sporothrix schenckii HMPREF1624_00136 N 0.000
fgeneshTM_pg.13_#_14 Tremella mesenterica fgeneshTM_pg.13_#_14 N 0.000