fgenesh2_kg.2__1750__AT1G74840.1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.2__1750__AT1G74840.1 T270754_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN

NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.898 0.979
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW

WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.898 0.979
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW

WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.898 0.979
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.789 0.936
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.777 0.894
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.761 0.851
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.759 0.872
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.753 0.894
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW

WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.753 0.894
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW

WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.753 0.894
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.751 0.830
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN

NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.702 0.830
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN

NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.701 0.809
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW

WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.701 0.809
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW

WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.701 0.809
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN

NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.680 0.809
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN

NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.674 0.723
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW

WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.674 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1750__AT1G74840.1 Myb 95 142

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

538 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Abd-B Drosophila melanogaster FBgn0000015 D 0.000
AEPI004973 Anopheles epiroticus AEPI004973 I 0.000
DICVIV_08822 Dictyocaulus viviparus DICVIV_08822 I 0.000
DME_0000365001 Dracunculus medinensis DME_0000365001 I 0.000
DME_0000789801 Dracunculus medinensis DME_0000789801 I 0.000
ECANG7_01860 Echinococcus canadensis ECANG7_01860 I 0.000
EmuJ_000824600 Echinococcus multilocularis EmuJ_000824600 I 0.000
EmuJ_000959700 Echinococcus multilocularis EmuJ_000959700 I 0.000
GPLIN_000726000 Globodera pallida GPLIN_000726000 I 0.000
GPUH_0000001901 Gongylonema pulchrum GPUH_0000001901 I 0.000
HCOI00497700 Haemonchus contortus HCOI00497700 I 0.000
HCOI00497900 Haemonchus contortus HCOI00497900 I 0.000
HCOI01784000 Haemonchus contortus HCOI01784000 I 0.000
HDID_0000820601 Hymenolepis diminuta HDID_0000820601 I 0.000
HmN_000187500 Hymenolepis microstoma HmN_000187500 I 0.000
HNAJ_0000530301 Hymenolepis nana HNAJ_0000530301 I 0.000
HPBE_0002125801 Heligmosomoides bakeri HPBE_0002125801 I 0.000
D918_00513 Trichuris suis D918_00513 I 0.000
BXY_1644900 Bursaphelenchus xylophilus BXY_1644900 I 0.000
ASU_13748 Ascaris suum ASU_13748 I 0.000
AFAF011271 Anopheles farauti AFAF011271 I 0.000
AFUN006867 Anopheles funestus AFUN006867 I 0.000
AMAM010796 Anopheles maculatus AMAM010796 I 0.000
AMEC007997 Anopheles melas AMEC007997 I 0.000
AMIN000119 Anopheles minimus AMIN000119 I 0.000
AQUA010393 Anopheles quadriannulatus AQUA010393 I 0.000
ASIS020073 Anopheles sinensis ASIS020073 I 0.000
LLOJ006217 Lutzomyia longipalpis LLOJ006217 I 0.000
MDOA007321 Musca domestica MDOA007321 I 0.000
PPAI009128 Phlebotomus papatasi PPAI009128 I 0.000
ACOC_0000951901 Angiostrongylus costaricensis ACOC_0000951901 I 0.000
ANCCAN_16140 Ancylostoma caninum ANCCAN_16140 I 0.000
ANCCAN_23047 Ancylostoma caninum ANCCAN_23047 I 0.000
ANCCEY_08302 Ancylostoma ceylanicum ANCCEY_08302 I 0.000
ANCDUO_02875 Ancylostoma duodenale ANCDUO_02875 I 0.000
ASIM_0000478501 Anisakis simplex ASIM_0000478501 I 0.000
HPLM_0001444701 Haemonchus placei HPLM_0001444701 I 0.000
L596_g25262 Steinernema carpocapsae L596_g25262 I 0.000
L889_g9230 Steinernema feltiae L889_g9230 I 0.000
PEQ_0001379601 Parascaris equorum PEQ_0001379601 I 0.000
SBAD_0000080701 Soboliphyme baturini SBAD_0000080701 I 0.000
scaffold1873-EXSNAP2012.2 Pristionchus exspectatus scaffold1873-EXSNAP2012.2 I 0.000
scaffold527-EXSNAP2012.16 Pristionchus exspectatus scaffold527-EXSNAP2012.16 I 0.000
SMUV_0000036501 Syphacia muris SMUV_0000036501 I 0.000
SMUV_0000627601 Syphacia muris SMUV_0000627601 I 0.000
SPAL_0000659000 Strongyloides papillosus SPAL_0000659000 I 0.000
SSTP_0000071500 Strongyloides stercoralis SSTP_0000071500 I 0.000
SVE_1848200 Strongyloides venezuelensis SVE_1848200 I 0.000
TASK_0000423701 Taenia asiatica TASK_0000423701 I 0.000
TCLT_0000305201 Thelazia callipaeda TCLT_0000305201 I 0.000
TELCIR_10285 Teladorsagia circumcincta TELCIR_10285 I 0.000
TMUE_s0047001500 Trichuris muris TMUE_s0047001500 I 0.000
TsM_000407000 Taenia solium TsM_000407000 I 0.000
TsM_001152100 Taenia solium TsM_001152100 I 0.000
TTAC_0000197601 Hydatigera taeniaeformis TTAC_0000197601 I 0.000
PEQ_0000367601 Parascaris equorum PEQ_0000367601 I 0.000
OFLC_0000337501 Onchocerca flexuosa OFLC_0000337501 I 0.000
L892_g9141 Steinernema scapterisci L892_g9141 I 0.000
L893_g25351 Steinernema glaseri L893_g25351 I 0.000
L898_g12854 Steinernema monticolum L898_g12854 I 0.000
L898_g2050 Steinernema monticolum L898_g2050 I 0.000
MCOS_0000513701 Mesocestoides corti MCOS_0000513701 I 0.000
MhA1_Contig468.frz3.gene38 Meloidogyne hapla MhA1_Contig468.frz3.gene38 I 0.000
NBR_0000568501 Nippostrongylus brasiliensis NBR_0000568501 I 0.000
NBR_0001986901 Nippostrongylus brasiliensis NBR_0001986901 I 0.000
NBR_0002007501 Nippostrongylus brasiliensis NBR_0002007501 I 0.000
nDi.2.2.2.g00407 Dirofilaria immitis nDi.2.2.2.g00407 I 0.000
NECAME_18596 Necator americanus NECAME_18596 I 0.000
NECAME_18614 Necator americanus NECAME_18614 I 0.000
nOo.2.0.1.g01207 Onchocerca ochengi nOo.2.0.1.g01207 I 0.000
nOo.2.0.1.g03745 Onchocerca ochengi nOo.2.0.1.g03745 I 0.000
nRc.2.0.1.g22076 Romanomermis culicivorax nRc.2.0.1.g22076 I 0.000
OESDEN_04863 Oesophagostomum dentatum OESDEN_04863 I 0.000
TTRE_0000023201 Trichuris trichiura TTRE_0000023201 I 0.000
ACHR003915 Anopheles christyi ACHR003915 I 0.000
CpipJ_CPIJ001021 Culex pipiens CpipJ_CPIJ001021 I 0.000
EFV62456 Trichinella spiralis EFV62456 I 0.000
ENSGACG00000020715 Gasterosteus aculeatus ENSGACG00000020715 I 0.000
ENSGMOG00000006424 Gadus morhua ENSGMOG00000006424 I 0.000
Abd-B Drosophila simulans FBgn0025043 I 0.000
Abd-B Drosophila sechellia FBgn0025061 I 0.000
GA11117 Drosophila pseudoobscura FBgn0071172 I 0.000
GF17921 Drosophila ananassae FBgn0094939 I 0.000
GG16806 Drosophila erecta FBgn0109036 I 0.000
GH18073 Drosophila grimshawi FBgn0125541 I 0.000
GI23752 Drosophila mojavensis FBgn0146477 I 0.000
GL23001 Drosophila persimilis FBgn0160591 I 0.000
GJ10598 Drosophila virilis FBgn0197878 I 0.000
GK13851 Drosophila willistoni FBgn0215859 I 0.000
GE26123 Drosophila yakuba FBgn0243162 I 0.000
GB51284 Apis mellifera GB51284 I 0.000
HelroG110662 Helobdella robusta HelroG110662 I 0.000
DAPPUDRAFT_347213 Daphnia pulex DAPPUDRAFT_347213 I 0.000
CRE24470 Caenorhabditis remanei CRE24470 I 0.000
CPIJ001021 Culex quinquefasciatus CPIJ001021 I 0.000
WUBG_01783 Wuchereria bancrofti WUBG_01783 I 0.000
WUBG_14236 Wuchereria bancrofti WUBG_14236 I 0.000
AAEL009743 Aedes aegypti AAEL009743 I 0.000
AAEL009933 Aedes aegypti AAEL009933 I 0.000
ACEP10423 Atta cephalotes ACEP10423 I 0.000
ACYPI003711 Acyrthosiphon pisum ACYPI003711 I 0.000
ADAC008864 Anopheles darlingi ADAC008864 I 0.000
AGAP004664 Anopheles gambiae AGAP004664 I 0.000
BGIBMGA006385 Bombyx mori BGIBMGA006385 I 0.000
Bm7133 Brugia malayi Bm7133 I 0.000
CapteG126009 Capitella teleta CapteG126009 I 0.000
CBG23030 Caenorhabditis briggsae CBG23030 I 0.000
CBN07280 Caenorhabditis brenneri CBN07280 I 0.000
CGI_10027388 Crassostrea gigas CGI_10027388 I 0.000
CJA05820 Caenorhabditis japonica CJA05820 I 0.000
CJA42104 Caenorhabditis japonica CJA42104 I 0.000
HMEL025035 Heliconius melpomene HMEL025035 I 0.000
ISCW021042 Ixodes scapularis ISCW021042 I 0.000
WBGene00242173 Onchocerca volvulus WBGene00242173 I 0.000
WBGene00245000 Onchocerca volvulus WBGene00245000 I 0.000
YQE_04570 Dendroctonus ponderosae YQE_04570 I 0.000
YQE_12260 Dendroctonus ponderosae YQE_12260 I 0.000
Cflo_00841--XP_394119.2_APIME Camponotus floridanus Cflo_00841--XP_394119.2_APIME I 0.000
Hsal_01810--XP_394119.2_APIME Harpegnathos saltator Hsal_01810--XP_394119.2_APIME I 0.000
Ocbimv22031197m.g Octopus bimaculoides Ocbimv22031197m.g I 0.000
Sakowv30000864m.g Saccoglossus kowalevskii Sakowv30000864m.g I 0.000
CLEC025235 Cimex lectularius CLEC025235 I 0.000
LCUP000270 Lucilia cuprina LCUP000270 I 0.000
LDEC005307 Leptinotarsa decemlineata LDEC005307 I 0.000
SMU15011167 Schmidtea mediterranea SMU15011167 I 0.000
SMU15040585 Schmidtea mediterranea SMU15040585 I 0.000
Minc03842 Meloidogyne incognita Minc03842 I 0.000
Minc07879 Meloidogyne incognita Minc07879 I 0.000
AARA011784 Anopheles arabiensis AARA011784 I 0.000
php-3 Caenorhabditis elegans WBGene00004024 I 0.000
tetur20g02350 Tetranychus urticae tetur20g02350 I 0.000
AATE001145 Anopheles atroparvus AATE001145 I 0.000
KGM_01497 Danaus plexippus KGM_01497 I 0.000
L798_07386 Zootermopsis nevadensis L798_07386 I 0.000
LOAG_02387 Loa loa LOAG_02387 I 0.000
LOAG_12837 Loa loa LOAG_12837 I 0.000
LotgiG89720 Lottia gigantea LotgiG89720 I 0.000
M404DRAFT_74218 Pisolithus tinctorius M404DRAFT_74218 I 0.000
MCINX017034 Melitaea cinxia MCINX017034 I 0.000
NV15142 Nasonia vitripennis NV15142 I 0.000
PHUM219670 Pediculus humanus PHUM219670 I 0.000
PISMIDRAFT_65337 Pisolithus microcarpus PISMIDRAFT_65337 I 0.000
SCLCIDRAFT_97512 Scleroderma citrinum SCLCIDRAFT_97512 I 0.000
SINV20763 Solenopsis invicta SINV20763 I 0.000
SMAR004172 Strigamia maritima SMAR004172 I 0.000
SPU_002632 Strongylocentrotus purpuratus SPU_002632 I 0.000
TC000889 Tribolium castaneum TC000889 I 0.000
tetur14g02380 Tetranychus urticae tetur14g02380 I 0.000
D917_04639 Trichinella nativa D917_04639 N 0.000