GLYMA18G42530 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA18G42530 T271748_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G38090
M07055_2.00
Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN

NVNRDWNWRGATAARNWTVDD
Dap-seq
OMalley et al.(2016)
At2g38090_col_a
0.812 0.904
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN

NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.779 0.904
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN

NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.746 0.819
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN

NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.746 0.819
AT5G58900
M07146_2.00
Arabidopsis thaliana
HHWWYCTTATCYWHW

WDWRGATAAGRWWDD
Dap-seq
OMalley et al.(2016)
At5g58900_col_a
0.671 0.819
AT5G58900
M07147_2.00
Arabidopsis thaliana
HWYMTTATCHWNWWH

DWWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a
0.671 0.819
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G42530.1 Myb 134 181

Links

Other Myb/SANT family TFs
Other Glycine max TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL008346 Aedes aegypti AAEL008346 N 0.000
L798_10211 Zootermopsis nevadensis L798_10211 I 0.000