GRMZM2G031323 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G031323 T271908_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK28187.1
M01286_2.00
Cannabis sativa
TACCTACC

GGTAGGTA
PBM
Lambert et al.(2019)
pTH11305
0.850 0.925
AtMYB74
M07104_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH

DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB74_colamp_a
0.817 0.892
AtMYB74
M07105_2.00
Arabidopsis thaliana
BYHYACCTAMYHHH

DDDRKTAGGTRDRV
Dap-seq
OMalley et al.(2016)
MYB74_col
0.817 0.892
AtMYB41
M07109_2.00
Arabidopsis thaliana
DHDBBYYACCTAMYW

WRKTAGGTRRVVHDH
Dap-seq
OMalley et al.(2016)
MYB41_col_a
0.768 0.860
MYB49
M07140_2.00
Arabidopsis thaliana
HDBBYYACCWAMYWH

DWRKTWGGTRRVVHD
Dap-seq
OMalley et al.(2016)
MYB49_col_a
0.705 0.849
MYB49
M07141_2.00
Arabidopsis thaliana
NYYYACCTAMYWHN

NDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB49_colamp_a
0.705 0.849
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.699 0.774
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.699 0.774
MYB39
M07106_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH

DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB39_col_a
0.698 0.753
MYB39
M07107_2.00
Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH

DNDDDDDDDWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB39_colamp_a
0.698 0.753
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.684 0.774
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.684 0.774
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH

DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.681 0.763
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY

RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.681 0.763
MYB58
M07005_2.00
Arabidopsis thaliana
NNYYYACCWAMCHHH

DDDGKTWGGTRRRNN
Dap-seq
OMalley et al.(2016)
MYB58_col_a
0.661 0.677
MYB58
M07006_2.00
Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH

DNNNNDDDGKTWGGTRDRNND
Dap-seq
OMalley et al.(2016)
MYB58_colamp_a
0.661 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G031323_P01 Myb 14 61
GRMZM2G031323_P01 Myb 67 112

Links

Other Myb/SANT family TFs
Other Zea mays TFs

618 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_17299 Aegilops tauschii F775_17299 I 0.000
BRADI3G45997 Brachypodium distachyon BRADI3G45997 N 0.000
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.000
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.000
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.000
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.000
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.000
LPERR02G16700 Leersia perrieri LPERR02G16700 N 0.000
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.000
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.000
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.000
OB11G16300 Oryza brachyantha OB11G16300 I 0.000
OB02G28310 Oryza brachyantha OB02G28310 N 0.000
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.000
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.000
OGLUM02G20980 Oryza glumaepatula OGLUM02G20980 N 0.000
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.000
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.000
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.000
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.000
OMERI02G20440 Oryza meridionalis OMERI02G20440 N 0.000
ONIVA02G22690 Oryza nivara ONIVA02G22690 N 0.000
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.000
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.000
OPUNC02G18630 Oryza punctata OPUNC02G18630 N 0.000
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.000
OPUNC04G11630 Oryza punctata OPUNC04G11630 N 0.000
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.000
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.000
ORUFI02G21740 Oryza rufipogon ORUFI02G21740 N 0.000
OS02G0558700 Oryza sativa OS02G0558700 N 0.000
OS11G0242300 Oryza sativa OS11G0242300 I 0.000
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.000
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.000
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.000
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.000
Si026882m.g Setaria italica Si026882m.g I 0.000
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.000
Sb04g022943 Sorghum bicolor Sb04g022943 N 0.000
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.000
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.000
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.000
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.000
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.000
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.000
GRMZM2G139740 Zea mays GRMZM2G139740 N 0.000
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.000
GRMZM2G087040 Zea mays GRMZM2G087040 N 0.000