GRMZM2G460869 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G460869 T272190_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.712 0.742
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.712 0.742
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.675 0.699
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.675 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G460869_P01 Myb 56 102
GRMZM2G460869_P01 Myb 108 153

Links

Other Myb/SANT family TFs
Other Zea mays TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sb03g010980 Sorghum bicolor Sb03g010980 I 0.748
Pavir.Hb01200 Panicum virgatum Pavir.Hb01200 I 0.730
Sb03g010970 Sorghum bicolor Sb03g010970 I 0.730
ORUFI01G12050 Oryza rufipogon ORUFI01G12050 I 0.727
Solyc10g081320.1 Solanum lycopersicum Solyc10g081320.1 I 0.727
OS01G0274800 Oryza sativa OS01G0274800 I 0.727
PGSC0003DMG400028119 Solanum tuberosum PGSC0003DMG400028119 I 0.727
OPUNC01G10870 Oryza punctata OPUNC01G10870 I 0.727
OGLUM01G12520 Oryza glumaepatula OGLUM01G12520 I 0.727
ONIVA01G13400 Oryza nivara ONIVA01G13400 I 0.727
OMERI01G10960 Oryza meridionalis OMERI01G10960 I 0.727
LPERR01G10360 Leersia perrieri LPERR01G10360 I 0.727
Sb03g010960 Sorghum bicolor Sb03g010960 I 0.721
GRMZM2G312419 Zea mays GRMZM2G312419 I 0.721
GRMZM2G111731 Zea mays GRMZM2G111731 I 0.721
Pavir.Ea01097 Panicum virgatum Pavir.Ea01097 I 0.721
GLYMA03G00980 Glycine max GLYMA03G00980 I 0.720
Si005038m.g Setaria italica Si005038m.g I 0.720
GSMUA_Achr10G12830_001 Musa acuminata GSMUA_Achr10G12830_001 I 0.720
GSMUA_Achr9G04990_001 Musa acuminata GSMUA_Achr9G04990_001 I 0.720
Si004691m.g Setaria italica Si004691m.g I 0.720
ATMYB69 Vitis vinifera VIT_04s0044g01380 I 0.715
GSMUA_Achr10G05080_001 Musa acuminata GSMUA_Achr10G05080_001 I 0.715
Pavir.Cb01957 Panicum virgatum Pavir.Cb01957 I 0.713
MYB56 Arabidopsis thaliana AT5G17800 D 0.712
PK28773.1 Cannabis sativa PK28773.1 I 0.711
cassava25953.m1 Manihot esculenta cassava25953.m1 I 0.711
Ciclev10020631m.g Citrus clementina Ciclev10020631m.g I 0.711
SapurV1A.1664s0020 Salix purpurea SapurV1A.1664s0020 I 0.711
SapurV1A.3733s0010 Salix purpurea SapurV1A.3733s0010 I 0.711
evm.TU.supercontig_73.4 Carica papaya evm.TU.supercontig_73.4 I 0.711
Pavir.J21755 Panicum virgatum Pavir.J21755 I 0.711
AMTR_s00119p00105590 Amborella trichopoda AMTR_s00119p00105590 I 0.711
POPTR_0013s06320 Populus trichocarpa POPTR_0013s06320 I 0.711
ATMYB54 Arabidopsis thaliana AT1G73410 I 0.708
Bostr.10273s0016 Boechera stricta Bostr.10273s0016 I 0.708
ATMYB54 Arabidopsis lyrata Al_scaffold_0002_2037 I 0.708
Cagra.4894s0009 Capsella grandiflora Cagra.4894s0009 I 0.708
Thhalv10019669m.g Eutrema salsugineum Thhalv10019669m.g I 0.708
Carubv10021434m.g Capsella rubella Carubv10021434m.g I 0.708
Bra015992 Brassica rapa Bra015992 I 0.708
Bo6g116800 Brassica oleracea Bo6g116800 I 0.708
Bo2g080540 Brassica oleracea Bo2g080540 I 0.708
Bra008096 Brassica rapa Bra008096 I 0.708
AtMYB56 Arabidopsis lyrata fgenesh2_kg.6__1780__AT5G17800.1 I 0.707
Bostr.26527s0427 Boechera stricta Bostr.26527s0427 I 0.707
Thhalv10014113m.g Eutrema salsugineum Thhalv10014113m.g I 0.707
AMTR_s00186p00015620 Amborella trichopoda AMTR_s00186p00015620 I 0.706
POPTR_0019s05740 Populus trichocarpa POPTR_0019s05740 I 0.706
Cucsa.016540 Cucumis sativus Cucsa.016540 I 0.706
e_gw1.91.11.1 Physcomitrella patens e_gw1.91.11.1 I 0.706
Bra006422 Brassica rapa Bra006422 I 0.705
Bo3g012780 Brassica oleracea Bo3g012780 I 0.705
BGIOSGA001907 Oryza indica BGIOSGA001907 I 0.704
Pavir.J16832 Panicum virgatum Pavir.J16832 I 0.703
SapurV1A.1416s0010 Salix purpurea SapurV1A.1416s0010 I 0.702
SapurV1A.1660s0020 Salix purpurea SapurV1A.1660s0020 I 0.702
Pavir.J31094 Panicum virgatum Pavir.J31094 I 0.701
PDK_20s1366461g001 Phoenix dactylifera PDK_20s1366461g001 I 0.701
Bo2g013970 Brassica oleracea Bo2g013970 I 0.701
Sb05g009460 Sorghum bicolor Sb05g009460 I 0.700
MDP0000172476 Malus domestica MDP0000172476 I 0.700
MDP0000878006 Malus domestica MDP0000878006 I 0.700
GSMUA_Achr6G32250_001 Musa acuminata GSMUA_Achr6G32250_001 I 0.700
GSMUA_Achr9G08480_001 Musa acuminata GSMUA_Achr9G08480_001 I 0.697
SELMODRAFT_6282 Selaginella moellendorffii SELMODRAFT_6282 I 0.696
Ca_08179 Cicer arietinum Ca_08179 I 0.696
SELMODRAFT_6284 Selaginella moellendorffii SELMODRAFT_6284 I 0.696
Pavir.J04678 Panicum virgatum Pavir.J04678 I 0.696
MTR_7g086960 Medicago truncatula MTR_7g086960 I 0.696
Si026751m.g Setaria italica Si026751m.g I 0.696
TRAES3BF063000030CFD_g Triticum aestivum TRAES3BF063000030CFD_g I 0.694
TCM_033560 Theobroma cacao TCM_033560 I 0.694
MLOC_71066 Hordeum vulgare MLOC_71066 I 0.694
Si011791m.g Setaria italica Si011791m.g I 0.693
mgf018311m Mimulus guttatus mgf018311m I 0.692
GLYMA19G29670 Glycine max GLYMA19G29670 I 0.692
gene29254-v1.0-hybrid Fragaria vesca gene29254-v1.0-hybrid I 0.691
MDP0000755899 Malus domestica MDP0000755899 I 0.691
Pm025457 Prunus mume Pm025457 I 0.691
PRUPE_ppa006434mg Prunus persica PRUPE_ppa006434mg I 0.691
SELMODRAFT_80553 Selaginella moellendorffii SELMODRAFT_80553 I 0.690
SELMODRAFT_127613 Selaginella moellendorffii SELMODRAFT_127613 I 0.690
gw1.200.30.1 Physcomitrella patens gw1.200.30.1 I 0.688
Lus10029746.g Linum usitatissimum Lus10029746.g I 0.688
gw1.76.8.1 Physcomitrella patens gw1.76.8.1 I 0.688
Gorai.006G015200 Gossypium raimondii Gorai.006G015200 I 0.688
VIT_01s0026g02600 Vitis vinifera VIT_01s0026g02600 I 0.687
TCM_011689 Theobroma cacao TCM_011689 I 0.687
Gorai.005G142000 Gossypium raimondii Gorai.005G142000 I 0.687
orange1.1g046309m.g Citrus sinensis orange1.1g046309m.g I 0.687
MDP0000146675 Malus domestica MDP0000146675 I 0.687
MDP0000136541 Malus domestica MDP0000136541 I 0.687
Lus10030452.g Linum usitatissimum Lus10030452.g I 0.687
orange1.1g047550m.g Citrus sinensis orange1.1g047550m.g I 0.687
SapurV1A.0149s0020 Salix purpurea SapurV1A.0149s0020 I 0.687
PDK_20s1403571g003 Phoenix dactylifera PDK_20s1403571g003 I 0.687
chr2.CM0641.440.nd Lotus japonicus chr2.CM0641.440.nd I 0.687
PK20989.1 Cannabis sativa PK20989.1 I 0.687
Lus10026611.g Linum usitatissimum Lus10026611.g I 0.687
Gorai.013G086400 Gossypium raimondii Gorai.013G086400 I 0.687
gw1.2.29.1 Physcomitrella patens gw1.2.29.1 I 0.687
cassava17309.m1 Manihot esculenta cassava17309.m1 I 0.687
cassava12017.valid.m1 Manihot esculenta cassava12017.valid.m1 I 0.687
29813.m001506 Ricinus communis 29813.m001506 I 0.687
mgf001214m Mimulus guttatus mgf001214m I 0.687
Ciclev10011967m.g Citrus clementina Ciclev10011967m.g I 0.687
evm.TU.supercontig_1.43 Carica papaya evm.TU.supercontig_1.43 I 0.687
Eucgr.G02492 Eucalyptus grandis Eucgr.G02492 I 0.687
Ciclev10031944m.g Citrus clementina Ciclev10031944m.g I 0.687
Ca_16374 Cicer arietinum Ca_16374 I 0.687
Solyc05g007870.1 Solanum lycopersicum Solyc05g007870.1 I 0.687
GLYMA20G04511 Glycine max GLYMA20G04511 I 0.687
PGSC0003DMG400018427 Solanum tuberosum PGSC0003DMG400018427 I 0.687
GLYMA01G05980 Glycine max GLYMA01G05980 I 0.687
GLYMA02G12105 Glycine max GLYMA02G12105 I 0.687
GLYMA07G35581 Glycine max GLYMA07G35581 I 0.687
MTR_5g041570 Medicago truncatula MTR_5g041570 I 0.687
MTR_4g082040 Medicago truncatula MTR_4g082040 I 0.687
AMTR_s00010p00264600 Amborella trichopoda AMTR_s00010p00264600 I 0.687
e_gw1.219.38.1 Physcomitrella patens e_gw1.219.38.1 I 0.686
Aquca_022_00293 Aquilegia coerulea Aquca_022_00293 I 0.686
GRMZM2G083239 Zea mays GRMZM2G083239 I 0.686
Bra023637 Brassica rapa Bra023637 I 0.686
Bo9g159830 Brassica oleracea Bo9g159830 I 0.686
Gorai.007G346400 Gossypium raimondii Gorai.007G346400 I 0.686
Cla010359 Citrullus lanatus Cla010359 I 0.684
Cucsa.284980 Cucumis sativus Cucsa.284980 I 0.684
PDK_20s1619721g001 Phoenix dactylifera PDK_20s1619721g001 I 0.684
VIT_14s0108g01010 Vitis vinifera VIT_14s0108g01010 I 0.684
GSMUA_Achr3G16490_001 Musa acuminata GSMUA_Achr3G16490_001 I 0.683
GSMUA_Achr3G09490_001 Musa acuminata GSMUA_Achr3G09490_001 I 0.683
cassava12378.valid.m1 Manihot esculenta cassava12378.valid.m1 I 0.682
Eucgr.K01542 Eucalyptus grandis Eucgr.K01542 I 0.682
cassava26779.m1 Manihot esculenta cassava26779.m1 I 0.681
mgf006675m Mimulus guttatus mgf006675m I 0.680
Pm006483 Prunus mume Pm006483 I 0.678
PRUPE_ppa025260mg Prunus persica PRUPE_ppa025260mg I 0.678
BGIOSGA034994 Oryza indica BGIOSGA034994 I 0.677
Ciclev10023285m.g Citrus clementina Ciclev10023285m.g I 0.677
ORUFI11G06340 Oryza rufipogon ORUFI11G06340 I 0.677
OGLUM11G05960 Oryza glumaepatula OGLUM11G05960 I 0.677
ORGLA11G0056700 Oryza glaberrima ORGLA11G0056700 I 0.677
Cagra.6254s0026 Capsella grandiflora Cagra.6254s0026 I 0.677
OPUNC11G06210 Oryza punctata OPUNC11G06210 I 0.677
Carubv10001376m.g Capsella rubella Carubv10001376m.g I 0.677
OMERI11G05160 Oryza meridionalis OMERI11G05160 I 0.677
OS11G0207600 Oryza sativa OS11G0207600 I 0.677
LPERR11G05690 Leersia perrieri LPERR11G05690 I 0.677
TRIUR3_35269 Triticum urartu TRIUR3_35269 I 0.677
ONIVA11G06220 Oryza nivara ONIVA11G06220 I 0.677
BRADI4G22730 Brachypodium distachyon BRADI4G22730 I 0.677
Traes_4AL_7A841CAD2 Triticum aestivum Traes_4AL_7A841CAD2 I 0.677
Traes_4DS_F6E1A4F88 Triticum aestivum Traes_4DS_F6E1A4F88 I 0.677
Cla000326 Citrullus lanatus Cla000326 I 0.677
MLOC_13062 Hordeum vulgare MLOC_13062 I 0.677
Traes_4BS_189002AB8 Triticum aestivum Traes_4BS_189002AB8 I 0.677
GSMUA_Achr6G15900_001 Musa acuminata GSMUA_Achr6G15900_001 I 0.676
MYB52 Arabidopsis thaliana AT1G17950 D 0.675
Cagra.2175s0026 Capsella grandiflora Cagra.2175s0026 I 0.675
Bra031008 Brassica rapa Bra031008 I 0.675
Bo8g104600 Brassica oleracea Bo8g104600 I 0.675
Carubv10012605m.g Capsella rubella Carubv10012605m.g I 0.675
ATMYB52 Arabidopsis lyrata scaffold_102001.1 I 0.675
PGSC0003DMG400024822 Solanum tuberosum PGSC0003DMG400024822 I 0.674
Solyc04g064540.2 Solanum lycopersicum Solyc04g064540.2 I 0.674
30137.m000436 Ricinus communis 30137.m000436 I 0.672
POPTR_0007s01430 Populus trichocarpa POPTR_0007s01430 I 0.672
POPTR_0005s06410 Populus trichocarpa POPTR_0005s06410 I 0.672
SapurV1A.2371s0030 Salix purpurea SapurV1A.2371s0030 I 0.672
SapurV1A.0118s0380 Salix purpurea SapurV1A.0118s0380 I 0.672
cassava5849.m1 Manihot esculenta cassava5849.m1 I 0.672
GSMUA_Achr6G17630_001 Musa acuminata GSMUA_Achr6G17630_001 I 0.671
MLOC_3926 Hordeum vulgare MLOC_3926 I 0.671
GRMZM5G803355 Zea mays GRMZM5G803355 I 0.671
TRAES3BF142600060CFD_g Triticum aestivum TRAES3BF142600060CFD_g I 0.671
TRIUR3_29043 Triticum urartu TRIUR3_29043 I 0.671
SELMODRAFT_6091 Selaginella moellendorffii SELMODRAFT_6091 I 0.670
SELMODRAFT_6100 Selaginella moellendorffii SELMODRAFT_6100 I 0.670
GSMUA_Achr11G10490_001 Musa acuminata GSMUA_Achr11G10490_001 I 0.670
cassava3020.m1 Manihot esculenta cassava3020.m1 I 0.669
Cla014084 Citrullus lanatus Cla014084 I 0.668
Cucsa.077160 Cucumis sativus Cucsa.077160 I 0.668
POPTR_0007s04140 Populus trichocarpa POPTR_0007s04140 I 0.667
Aquca_002_00639 Aquilegia coerulea Aquca_002_00639 I 0.667
mgf021546m Mimulus guttatus mgf021546m I 0.667
SapurV1A.0171s0440 Salix purpurea SapurV1A.0171s0440 I 0.667
Cucsa.189540 Cucumis sativus Cucsa.189540 I 0.667
POPTR_0010s17470 Populus trichocarpa POPTR_0010s17470 I 0.666
Thhalv10008597m.g Eutrema salsugineum Thhalv10008597m.g I 0.666
Bra016575 Brassica rapa Bra016575 I 0.666
Bo8g067590 Brassica oleracea Bo8g067590 I 0.666
Bra002107 Brassica rapa Bra002107 I 0.665
OMERI08G13100 Oryza meridionalis OMERI08G13100 I 0.664
Pavir.Fb01599 Panicum virgatum Pavir.Fb01599 I 0.664
ORUFI08G17710 Oryza rufipogon ORUFI08G17710 I 0.664
ORGLA08G0138700 Oryza glaberrima ORGLA08G0138700 I 0.664
BRADI3G36740 Brachypodium distachyon BRADI3G36740 I 0.664
ONIVA08G17040 Oryza nivara ONIVA08G17040 I 0.664
OS08G0435700 Oryza sativa OS08G0435700 I 0.664
OGLUM08G16550 Oryza glumaepatula OGLUM08G16550 I 0.664
OPUNC08G13850 Oryza punctata OPUNC08G13850 I 0.664
LPERR08G13020 Leersia perrieri LPERR08G13020 I 0.664
BGIOSGA028724 Oryza indica BGIOSGA028724 I 0.664
OBART08G15790 Oryza barthii OBART08G15790 I 0.664
Sb07g021280 Sorghum bicolor Sb07g021280 I 0.664
GRMZM2G428555 Zea mays GRMZM2G428555 I 0.664
TCM_001496 Theobroma cacao TCM_001496 I 0.663
TCM_035359 Theobroma cacao TCM_035359 I 0.662
MDP0000291518 Malus domestica MDP0000291518 I 0.662
Gorai.013G106600 Gossypium raimondii Gorai.013G106600 I 0.662
GSMUA_Achr6G02580_001 Musa acuminata GSMUA_Achr6G02580_001 I 0.662
Gorai.009G251700 Gossypium raimondii Gorai.009G251700 I 0.662
MTR_3g089045 Medicago truncatula MTR_3g089045 I 0.662
Ciclev10001803m.g Citrus clementina Ciclev10001803m.g I 0.662
Eucgr.F02756 Eucalyptus grandis Eucgr.F02756 I 0.662
PRUPE_ppa016398mg Prunus persica PRUPE_ppa016398mg I 0.662
MDP0000852158 Malus domestica MDP0000852158 I 0.662
GLYMA06G12691 Glycine max GLYMA06G12691 I 0.662
GLYMA04G42110 Glycine max GLYMA04G42110 I 0.662
orange1.1g020106m.g Citrus sinensis orange1.1g020106m.g I 0.662
POPTR_0008s08760 Populus trichocarpa POPTR_0008s08760 I 0.662
Pm022705 Prunus mume Pm022705 I 0.662
Cucsa.337000 Cucumis sativus Cucsa.337000 I 0.661
Gorai.007G253200 Gossypium raimondii Gorai.007G253200 I 0.661
Cla017770 Citrullus lanatus Cla017770 I 0.661