GSMUA_Achr1G23220_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr1G23220_001 T272335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.733 0.851
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.715 0.809
HHO3
M02289_2.00 		Arabidopsis thaliana
NWGATWCBNN
NNVGWATCWN		 PBM
Weirauch et al.(2014)
pTH7278 		0.707 0.809
HHO3
M07016_2.00 		Arabidopsis thaliana
NNDHNNAAKATTCY
RGAATMTTNNDHNN		 Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a 		0.707 0.809
HHO3
M07017_2.00 		Arabidopsis thaliana
HNNAAKATTCY
RGAATMTTNND		 Dap-seq
OMalley et al.(2016)
At1g25550_col 		0.707 0.809
HHO2
M02290_2.00 		Arabidopsis thaliana
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH7115 		0.689 0.787
HHO2
M07029_2.00 		Arabidopsis thaliana
AKATTCY
RGAATMT		 Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a 		0.689 0.787
HHO2
M07030_2.00 		Arabidopsis thaliana
RDATYNNAGATTC
GAATCTNNRATHY		 Dap-seq
OMalley et al.(2016)
At1g68670_col 		0.689 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P23220_001 Myb 141 192

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G03680_001 Musa acuminata GSMUA_Achr4G03680_001 I 0.753
PK19779.1 Cannabis sativa PK19779.1 D 0.733
Gorai.013G080200 Gossypium raimondii Gorai.013G080200 I 0.733
GLYMA02G10940 Glycine max GLYMA02G10940 I 0.726
MTR_5g054300 Medicago truncatula MTR_5g054300 I 0.726
GLYMA01G21900 Glycine max GLYMA01G21900 I 0.726
ORUFI02G14900 Oryza rufipogon ORUFI02G14900 I 0.715
ORGLA02G0127400 Oryza glaberrima ORGLA02G0127400 I 0.715
Aquca_010_00298 Aquilegia coerulea Aquca_010_00298 I 0.715
NIGT1 Oryza sativa OS02G0325600 D 0.715
PGSC0003DMG400000828 Solanum tuberosum PGSC0003DMG400000828 I 0.715
POPTR_0008s11630 Populus trichocarpa POPTR_0008s11630 I 0.715
Pavir.Ab00626 Panicum virgatum Pavir.Ab00626 I 0.715
ONIVA02G15910 Oryza nivara ONIVA02G15910 I 0.715
Cucsa.365440 Cucumis sativus Cucsa.365440 I 0.715
OB02G22950 Oryza brachyantha OB02G22950 I 0.715
Aquca_026_00236 Aquilegia coerulea Aquca_026_00236 I 0.715
OBART02G14690 Oryza barthii OBART02G14690 I 0.715
OGLUM02G14610 Oryza glumaepatula OGLUM02G14610 I 0.715
OMERI02G14870 Oryza meridionalis OMERI02G14870 I 0.715
SapurV1A.1001s0050 Salix purpurea SapurV1A.1001s0050 I 0.715
Bostr.0556s0249 Boechera stricta Bostr.0556s0249 I 0.715
Pavir.Aa02952 Panicum virgatum Pavir.Aa02952 I 0.715
MDP0000202657 Malus domestica MDP0000202657 I 0.715
Traes_2BS_10A8CAB27 Triticum aestivum Traes_2BS_10A8CAB27 I 0.715
TCM_011857 Theobroma cacao TCM_011857 I 0.715
VIT_01s0011g03110 Vitis vinifera VIT_01s0011g03110 I 0.715
Cla008104 Citrullus lanatus Cla008104 I 0.715
28883.m000751 Ricinus communis 28883.m000751 I 0.715
Pm029019 Prunus mume Pm029019 I 0.715
MDP0000703817 Malus domestica MDP0000703817 I 0.715
Solyc05g009720.2 Solanum lycopersicum Solyc05g009720.2 I 0.715
evm.TU.supercontig_1.213 Carica papaya evm.TU.supercontig_1.213 I 0.715
Gorai.008G185500 Gossypium raimondii Gorai.008G185500 I 0.715
MLOC_72007 Hordeum vulgare MLOC_72007 I 0.715
PRUPE_ppa007222mg Prunus persica PRUPE_ppa007222mg I 0.715
Carubv10018983m.g Capsella rubella Carubv10018983m.g I 0.715
Sb08g003180 Sorghum bicolor Sb08g003180 I 0.715
Cagra.0167s0004 Capsella grandiflora Cagra.0167s0004 I 0.715
OPUNC02G13150 Oryza punctata OPUNC02G13150 I 0.715
Bra025161 Brassica rapa Bra025161 I 0.715
Bo7g082060 Brassica oleracea Bo7g082060 I 0.715
F775_13221 Aegilops tauschii F775_13221 I 0.715
Thhalv10004475m.g Eutrema salsugineum Thhalv10004475m.g I 0.715
AMTR_s00093p00110710 Amborella trichopoda AMTR_s00093p00110710 I 0.715
BRADI3G10730 Brachypodium distachyon BRADI3G10730 I 0.715
LPERR02G11880 Leersia perrieri LPERR02G11880 I 0.715
GSMUA_Achr11G13410_001 Musa acuminata GSMUA_Achr11G13410_001 I 0.715
Lus10034280.g Linum usitatissimum Lus10034280.g I 0.713
fgenesh1_pg.scaffold_166000054 Physcomitrella patens fgenesh1_pg.scaffold_166000054 I 0.709
SELMODRAFT_402040 Selaginella moellendorffii SELMODRAFT_402040 I 0.709
SELMODRAFT_423260 Selaginella moellendorffii SELMODRAFT_423260 I 0.709
AMTR_s00033p00241280 Amborella trichopoda AMTR_s00033p00241280 I 0.709
GSMUA_Achr6G34680_001 Musa acuminata GSMUA_Achr6G34680_001 I 0.709
Cucsa.283860 Cucumis sativus Cucsa.283860 I 0.709
AMTR_s00122p00127250 Amborella trichopoda AMTR_s00122p00127250 I 0.709
Cla020676 Citrullus lanatus Cla020676 I 0.709
Lus10035043.g Linum usitatissimum Lus10035043.g I 0.708
Lus10041485.g Linum usitatissimum Lus10041485.g I 0.708
chr2.CM1731.80.nc Lotus japonicus chr2.CM1731.80.nc I 0.708
Lus10021699.g Linum usitatissimum Lus10021699.g I 0.708
Bostr.12659s0399 Boechera stricta Bostr.12659s0399 I 0.707
Cagra.3392s0001 Capsella grandiflora Cagra.3392s0001 I 0.707
HHO3 Arabidopsis thaliana AT1G25550 D 0.707
Al_scaffold_0001_2706 Arabidopsis lyrata Al_scaffold_0001_2706 I 0.707
Carubv10009492m.g Capsella rubella Carubv10009492m.g I 0.707
Thhalv10008115m.g Eutrema salsugineum Thhalv10008115m.g I 0.707
Si019945m.g Setaria italica Si019945m.g I 0.701
GSMUA_Achr9G26570_001 Musa acuminata GSMUA_Achr9G26570_001 I 0.701
cassava11986.valid.m1 Manihot esculenta cassava11986.valid.m1 I 0.697
SELMODRAFT_66160 Selaginella moellendorffii SELMODRAFT_66160 I 0.697
GLYMA20G32770 Glycine max GLYMA20G32770 I 0.693
Ca_08434 Cicer arietinum Ca_08434 I 0.693
mgf023459m Mimulus guttatus mgf023459m I 0.693
Thhalv10018737m.g Eutrema salsugineum Thhalv10018737m.g I 0.689
HHO2 Arabidopsis thaliana AT1G68670 D 0.689
Bostr.26959s0022 Boechera stricta Bostr.26959s0022 I 0.689
Bo6g107160 Brassica oleracea Bo6g107160 I 0.689
Cagra.0613s0015 Capsella grandiflora Cagra.0613s0015 I 0.689
HHO1 Arabidopsis thaliana AT3G25790 I 0.689
Bo2g061130 Brassica oleracea Bo2g061130 I 0.689
fgenesh2_kg.2__1124__AT1G68670.1 Arabidopsis lyrata fgenesh2_kg.2__1124__AT1G68670.1 I 0.689
Bra004330 Brassica rapa Bra004330 I 0.689
Bra038360 Brassica rapa Bra038360 I 0.689
Carubv10020552m.g Capsella rubella Carubv10020552m.g I 0.689
GSMUA_Achr4G28210_001 Musa acuminata GSMUA_Achr4G28210_001 I 0.687
GSMUA_Achr2G13380_001 Musa acuminata GSMUA_Achr2G13380_001 I 0.687
GSMUA_Achr3G21090_001 Musa acuminata GSMUA_Achr3G21090_001 I 0.686
Aquca_002_01118 Aquilegia coerulea Aquca_002_01118 I 0.684
mgf007637m Mimulus guttatus mgf007637m I 0.683
MTR_1g093080 Medicago truncatula MTR_1g093080 I 0.675
GRMZM2G159119 Zea mays GRMZM2G159119 I 0.675
chr5.CM0095.150.nc Lotus japonicus chr5.CM0095.150.nc I 0.675
GLYMA10G34780 Glycine max GLYMA10G34780 I 0.675
orange1.1g016585m.g Citrus sinensis orange1.1g016585m.g I 0.675
GRMZM2G016370 Zea mays GRMZM2G016370 I 0.675
Eucgr.I01178 Eucalyptus grandis Eucgr.I01178 I 0.675
Ciclev10031793m.g Citrus clementina Ciclev10031793m.g I 0.675
GSMUA_Achr9G09630_001 Musa acuminata GSMUA_Achr9G09630_001 I 0.674
Eucgr.G02343 Eucalyptus grandis Eucgr.G02343 I 0.672
POPTR_0010s13900 Populus trichocarpa POPTR_0010s13900 I 0.672
mgf006847m Mimulus guttatus mgf006847m I 0.672
cassava43327.valid.m1 Manihot esculenta cassava43327.valid.m1 I 0.672
Bra017349 Brassica rapa Bra017349 I 0.672
Bo9g075880 Brassica oleracea Bo9g075880 I 0.672
gene31899-v1.0-hybrid Fragaria vesca gene31899-v1.0-hybrid I 0.669
PK04145.1 Cannabis sativa PK04145.1 I 0.669
gene24094-v1.0-hybrid Fragaria vesca gene24094-v1.0-hybrid I 0.669
SapurV1A.0090s0480 Salix purpurea SapurV1A.0090s0480 I 0.669
evm.TU.supercontig_62.51 Carica papaya evm.TU.supercontig_62.51 I 0.669
MDP0000504079 Malus domestica MDP0000504079 I 0.669
Gorai.008G073300 Gossypium raimondii Gorai.008G073300 I 0.669
Gorai.008G026300 Gossypium raimondii Gorai.008G026300 I 0.669
Gorai.012G150500 Gossypium raimondii Gorai.012G150500 I 0.669
Gorai.013G040600 Gossypium raimondii Gorai.013G040600 I 0.669
MDP0000200243 Malus domestica MDP0000200243 I 0.669
orange1.1g015403m.g Citrus sinensis orange1.1g015403m.g I 0.669
VIT_07s0197g00060 Vitis vinifera VIT_07s0197g00060 I 0.669
Solyc01g108300.2 Solanum lycopersicum Solyc01g108300.2 I 0.669
PRUPE_ppa006812mg Prunus persica PRUPE_ppa006812mg I 0.669
TCM_000558 Theobroma cacao TCM_000558 I 0.669
Eucgr.H01993 Eucalyptus grandis Eucgr.H01993 I 0.669
VIT_03s0063g01060 Vitis vinifera VIT_03s0063g01060 I 0.669
POPTR_0009s10980 Populus trichocarpa POPTR_0009s10980 I 0.669
GSMUA_Achr7G00660_001 Musa acuminata GSMUA_Achr7G00660_001 I 0.669
GLYMA01G39040 Glycine max GLYMA01G39040 I 0.669
GLYMA11G06230 Glycine max GLYMA11G06230 I 0.669
GLYMA17G20520 Glycine max GLYMA17G20520 I 0.669
GSMUA_Achr10G08270_001 Musa acuminata GSMUA_Achr10G08270_001 I 0.669
Cla016244 Citrullus lanatus Cla016244 I 0.669
TCM_006998 Theobroma cacao TCM_006998 I 0.669
Eucgr.G01503 Eucalyptus grandis Eucgr.G01503 I 0.669
Ciclev10028556m.g Citrus clementina Ciclev10028556m.g I 0.669
Pm021479 Prunus mume Pm021479 I 0.669
Cucsa.220080 Cucumis sativus Cucsa.220080 I 0.669
cassava29454.valid.m1 Manihot esculenta cassava29454.valid.m1 I 0.669
cassava20352.m1 Manihot esculenta cassava20352.m1 I 0.669
29676.m001636 Ricinus communis 29676.m001636 I 0.669
cassava29869.valid.m1 Manihot esculenta cassava29869.valid.m1 I 0.669
29780.m001324 Ricinus communis 29780.m001324 I 0.669
cassava11925.valid.m1 Manihot esculenta cassava11925.valid.m1 I 0.669
fgenesh1_pm.C_scaffold_5000265 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000265 I 0.666
SapurV1A.0079s0410 Salix purpurea SapurV1A.0079s0410 I 0.666
POPTR_0007s11470 Populus trichocarpa POPTR_0007s11470 I 0.666
Gorai.010G067300 Gossypium raimondii Gorai.010G067300 I 0.666
OLONG_018167 Oryza longistaminata OLONG_018167 I 0.662
Cucsa.110080 Cucumis sativus Cucsa.110080 I 0.662
TRIUR3_20779 Triticum urartu TRIUR3_20779 I 0.662
chr2.LjT16G06.130.nd Lotus japonicus chr2.LjT16G06.130.nd I 0.661
PGSC0003DMG400025801 Solanum tuberosum PGSC0003DMG400025801 I 0.661
GSMUA_Achr4G23210_001 Musa acuminata GSMUA_Achr4G23210_001 I 0.661