CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr7G18680_001
(
Musa acuminata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GSMUA_Achr7G18680_001
T272591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY
RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.763
0.872
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.695
0.830
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr7P18680_001
Myb
14
61
KGPWTTEEDKRLINFMLTNGQCCWRVVPKLAGLLRCGKSCRLRWTNYL
GSMUA_Achr7P18680_001
Myb
67
123
RGLLSEEEEKMVIELHSQLGNRHAAAAPHLPSSWSRIASHLRGRTDNEIKNHWNTHI
Links
Other
Myb/SANT
family TFs
Other
Musa acuminata
TFs
160 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy