maker-pir_contig_548-fgenesh-gene-0.4 (Pythium irregulare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 maker-pir_contig_548-fgenesh-gene-0.4 T274155_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra80938
M02333_2.00 		Phytophthora ramorum
NNGWABCYWN
NWRGVTWCNN		 PBM
Weirauch et al.(2014)
pTH7925 		0.664 0.761
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPI00000020307 Myb 59 104

Links

Other Myb/SANT family TFs
Other Pythium irregulare TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I 0.778
Physo132946 Phytophthora sojae Physo132946 I 0.760
Physo132943 Phytophthora sojae Physo132943 I 0.760
PYU1_G002831 Pythium ultimum PYU1_G002831 N 0.739
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.734
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I 0.730
PYU1_G002833 Pythium ultimum PYU1_G002833 I 0.723
Physo132945 Phytophthora sojae Physo132945 I 0.721
PYU1_G002826 Pythium ultimum PYU1_G002826 N 0.720
PYU1_G002835 Pythium ultimum PYU1_G002835 I 0.718
PYU1_G002832 Pythium ultimum PYU1_G002832 N 0.710
maker-pir_contig_435-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.6 I 0.700
F443_20702 Phytophthora parasitica F443_20702 I 0.700
F443_20703 Phytophthora parasitica F443_20703 I 0.698
estExt_Genewise1Plus.C_2050016 Phytophthora capsici estExt_Genewise1Plus.C_2050016 I 0.696
estExt_Genewise1Plus.C_180162 Phytophthora capsici estExt_Genewise1Plus.C_180162 I 0.695
PITG_14400 Phytophthora infestans PITG_14400 I 0.670
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I 0.670
F443_20671 Phytophthora parasitica F443_20671 I 0.670
maker-piw_contig_50-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_50-fgenesh-gene-0.0 N 0.670
fgenesh_scip_prom.28083.1909 Phytophthora lateralis fgenesh_scip_prom.28083.1909 I 0.667
F443_19686 Phytophthora parasitica F443_19686 I 0.667
PITG_18789 Phytophthora infestans PITG_18789 I 0.667
Phyra95260 Phytophthora ramorum Phyra95260 I 0.667
Phyra87784 Phytophthora ramorum Phyra87784 I 0.667
estExt_fgenesh1_kg.C_3051400005 Phytophthora capsici estExt_fgenesh1_kg.C_3051400005 I 0.667
Physo132941 Phytophthora sojae Physo132941 I 0.664
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.664
Phyra80938 Phytophthora ramorum Phyra80938 D 0.664
F443_08983 Phytophthora parasitica F443_08983 I 0.664
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.664