OGLUM06G23260 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM06G23260 T275765_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.819 0.945
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.674 0.780
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW

WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.674 0.780
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH

DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.674 0.780
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.663 0.747
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G23260.1 Myb 15 61
OGLUM06G23260.1 Myb 67 110

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB44 Arabidopsis thaliana AT5G67300 D 0.674
PK07741.1 Cannabis sativa PK07741.1 D 0.663
OS02G0187700 Oryza sativa OS02G0187700 D 0.819
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.670
mgf003084m Mimulus guttatus mgf003084m I 0.690
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.697
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.670
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.721
29970.m000987 Ricinus communis 29970.m000987 I 0.667
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.671
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.703
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.670
mgf006151m Mimulus guttatus mgf006151m I 0.689
mgf018580m Mimulus guttatus mgf018580m I 0.669
mgf023922m Mimulus guttatus mgf023922m I 0.675
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.678
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.710
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.663
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.693
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.676
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.695
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.674
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.674
mgf025567m Mimulus guttatus mgf025567m I 0.714
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.692
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.666
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.676
Cla014191 Citrullus lanatus Cla014191 I 0.671
Ca_02182 Cicer arietinum Ca_02182 I 0.676
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.723
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.685
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I 0.663
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I 0.667
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.698
TRIUR3_25447 Triticum urartu TRIUR3_25447 I 0.839
Traes_7DL_1FA87027B Triticum aestivum Traes_7DL_1FA87027B I 0.839
Cla020946 Citrullus lanatus Cla020946 I 0.670
Cla022889 Citrullus lanatus Cla022889 I 0.721
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.679
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.667
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.663
30170.m013927 Ricinus communis 30170.m013927 I 0.676
30170.m013698 Ricinus communis 30170.m013698 I 0.692
29801.m003096 Ricinus communis 29801.m003096 I 0.715
Pm018862 Prunus mume Pm018862 I 0.674
Pm005332 Prunus mume Pm005332 I 0.692
Pm005220 Prunus mume Pm005220 I 0.676
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.760
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.672
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.706
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.684
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.676
Pavir.J29846 Panicum virgatum Pavir.J29846 I 0.723
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.801
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.677
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.677
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I 0.853
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I 0.853
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.773
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I 0.671
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.691
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.692
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.668
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.682
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.693
PK29071.1 Cannabis sativa PK29071.1 I 0.691
PK17282.1 Cannabis sativa PK17282.1 I 0.695
PK16550.1 Cannabis sativa PK16550.1 I 0.675
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.663
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.709
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.709
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.792
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.693
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I 0.683
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.676
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.675
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.690
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.667
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.664
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.687
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.669
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.676
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.687
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.699
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.705
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.676
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.695
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.663
MDP0000894463 Malus domestica MDP0000894463 I 0.676
MDP0000463846 Malus domestica MDP0000463846 I 0.692
MDP0000284922 Malus domestica MDP0000284922 I 0.670
MDP0000275800 Malus domestica MDP0000275800 I 0.688
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.694
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.666
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.692
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.703
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I 0.678
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.682
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.663
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.663
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.732
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.690
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.697
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.708
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.723
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.718
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.705
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.801
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.676
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.819
MLOC_64963 Hordeum vulgare MLOC_64963 I 0.809
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.760
MLOC_63964 Hordeum vulgare MLOC_63964 I 0.839
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.696
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.760
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.872
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.677
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.743
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.676
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.762
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.819
BRADI1G30252 Brachypodium distachyon BRADI1G30252 I 0.748
Bra012149 Brassica rapa Bra012149 I 0.674
Bo7g063830 Brassica oleracea Bo7g063830 I 0.674
Bo2g167960 Brassica oleracea Bo2g167960 I 0.674
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.769
BGIOSGA020819 Oryza indica BGIOSGA020819 I 0.909
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.707
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.676
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.692
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.710
GRMZM5G803308 Zea mays GRMZM5G803308 I 0.853
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.677
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.801
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.744
GRMZM2G078820 Zea mays GRMZM2G078820 I 0.848
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.791
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.676
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.693
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.661
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.672
OB09G10200 Oryza brachyantha OB09G10200 I 0.769
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.760
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.836
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.801
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.677
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.773
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.676
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.692
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.667
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.709
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.736
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.674
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.704
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.704
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.696
TCM_033907 Theobroma cacao TCM_033907 I 0.717
TCM_007138 Theobroma cacao TCM_007138 I 0.695
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.666
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.663
Si032789m.g Setaria italica Si032789m.g I 0.773
Si017917m.g Setaria italica Si017917m.g I 0.801
Si006938m.g Setaria italica Si006938m.g I 0.853
Si001686m.g Setaria italica Si001686m.g I 0.677
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.682
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.684
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.819
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.769
ONIVA06G26080 Oryza nivara ONIVA06G26080 I 0.909
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.819
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.769
OMERI06G22090 Oryza meridionalis OMERI06G22090 I 0.909
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.819
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.769
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.819
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.879
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.769
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.819
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.666
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.663
OS09G0106700 Oryza sativa OS09G0106700 I 0.769
OS06G0637500 Oryza sativa OS06G0637500 I 0.909
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.769
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I 0.909
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.819
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.769
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I 0.909
OBART09G00310 Oryza barthii OBART09G00310 I 0.769