OMERI04G13500 (Oryza meridionalis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OMERI04G13500 T276083_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB80
M07142_2.00
Arabidopsis thaliana
NYYYACCTAMYWHNN

NNDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MS188_col_a
0.814 0.860
MYB80
M07143_2.00
Arabidopsis thaliana
YYYACCTAMYTWNNN

NNNWARKTAGGTRRR
Dap-seq
OMalley et al.(2016)
MS188_colamp_a
0.814 0.860
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI04G13500.5 Myb 14 61
OMERI04G13500.5 Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza meridionalis TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB80 Arabidopsis thaliana AT5G56110 D 0.814
TCM_042012 Theobroma cacao TCM_042012 I 0.662
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.670
Cucsa.148040 Cucumis sativus Cucsa.148040 I 0.674
Aquca_005_00315 Aquilegia coerulea Aquca_005_00315 I 0.886
Aquca_062_00019 Aquilegia coerulea Aquca_062_00019 I 0.662
Bostr.26833s0652 Boechera stricta Bostr.26833s0652 I 0.823
Cagra.3745s0008 Capsella grandiflora Cagra.3745s0008 I 0.814
Carubv10027619m.g Capsella rubella Carubv10027619m.g I 0.814
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I 0.877
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I 0.662
Ciclev10028804m.g Citrus clementina Ciclev10028804m.g I 0.662
Eucgr.F03656 Eucalyptus grandis Eucgr.F03656 I 0.884
Cucsa.041880 Cucumis sativus Cucsa.041880 I 0.887
cassava33918.m1 Manihot esculenta cassava33918.m1 I 0.887
cassava28503.m1 Manihot esculenta cassava28503.m1 I 0.662
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I 0.909
Traes_2DL_A03AB7608 Triticum aestivum Traes_2DL_A03AB7608 I 0.864
TRIUR3_35325 Triticum urartu TRIUR3_35325 I 0.909
AtMYB103 Vitis vinifera VIT_19s0015g01280 I 0.887
Ca_17657 Cicer arietinum Ca_17657 I 0.887
Cla004524 Citrullus lanatus Cla004524 I 0.877
Cla007838 Citrullus lanatus Cla007838 I 0.674
Cla019747 Citrullus lanatus Cla019747 I 0.670
Pm001105 Prunus mume Pm001105 I 0.662
Pm026353 Prunus mume Pm026353 I 0.673
cassava27131.m1 Manihot esculenta cassava27131.m1 I 0.662
evm.TU.supercontig_102.29 Carica papaya evm.TU.supercontig_102.29 I 0.662
evm.TU.supercontig_12.83 Carica papaya evm.TU.supercontig_12.83 I 0.863
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I 0.881
MDP0000262514 Malus domestica MDP0000262514 I 0.662
MDP0000786507 Malus domestica MDP0000786507 I 0.662
orange1.1g019787m.g Citrus sinensis orange1.1g019787m.g I 0.662
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I 0.662
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I 0.909
Pavir.J28142 Panicum virgatum Pavir.J28142 I 0.791
SapurV1A.0049s0100 Salix purpurea SapurV1A.0049s0100 I 0.662
SapurV1A.0338s0180 Salix purpurea SapurV1A.0338s0180 I 0.846
SapurV1A.0395s0050 Salix purpurea SapurV1A.0395s0050 I 0.851
SapurV1A.1188s0040 Salix purpurea SapurV1A.1188s0040 I 0.662
Thhalv10015622m.g Eutrema salsugineum Thhalv10015622m.g I 0.814
MDP0000245436 Malus domestica MDP0000245436 I 0.662
MDP0000229498 Malus domestica MDP0000229498 I 0.662
MDP0000124992 Malus domestica MDP0000124992 I 0.662
gene09663-v1.0-hybrid Fragaria vesca gene09663-v1.0-hybrid I 0.662
Gorai.006G162800 Gossypium raimondii Gorai.006G162800 I 0.688
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I 0.887
Gorai.013G269300 Gossypium raimondii Gorai.013G269300 I 0.662
Lus10001394.g Linum usitatissimum Lus10001394.g I 0.673
Lus10011606.g Linum usitatissimum Lus10011606.g I 0.668
Lus10013830.g Linum usitatissimum Lus10013830.g I 0.692
Lus10016139.g Linum usitatissimum Lus10016139.g I 0.662
Lus10021428.g Linum usitatissimum Lus10021428.g I 0.662
Lus10023002.g Linum usitatissimum Lus10023002.g I 0.673
Lus10026543.g Linum usitatissimum Lus10026543.g I 0.692
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I 0.676
Al_scaffold_0008_2049 Arabidopsis lyrata Al_scaffold_0008_2049 I 0.814
GLYMA18G07960 Glycine max GLYMA18G07960 I 0.887
GRMZM2G104789 Zea mays GRMZM2G104789 I 0.668
GRMZM2G173633 Zea mays GRMZM2G173633 I 0.909
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I 0.661
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.665
LPERR04G12420 Leersia perrieri LPERR04G12420 I 0.900
MTR_2g095520 Medicago truncatula MTR_2g095520 I 0.662
MTR_3g461490 Medicago truncatula MTR_3g461490 I 0.887
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.670
OB04G23000 Oryza brachyantha OB04G23000 I 0.909
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I 0.909
ONIVA04G13800 Oryza nivara ONIVA04G13800 I 0.909
GLYMA13G39760 Glycine max GLYMA13G39760 I 0.669
GLYMA12G30140 Glycine max GLYMA12G30140 I 0.673
AMTR_s00076p00157170 Amborella trichopoda AMTR_s00076p00157170 I 0.662
BGIOSGA014912 Oryza indica BGIOSGA014912 I 0.909
BGIOSGA030830 Oryza indica BGIOSGA030830 I 0.889
Bo1g051220 Brassica oleracea Bo1g051220 I 0.676
Bo2g036530 Brassica oleracea Bo2g036530 I 0.811
Bo9g123440 Brassica oleracea Bo9g123440 I 0.803
Bra002847 Brassica rapa Bra002847 I 0.814
Bra026281 Brassica rapa Bra026281 I 0.676
Bra035604 Brassica rapa Bra035604 I 0.831
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I 0.885
F775_22620 Aegilops tauschii F775_22620 I 0.909
AtMYB103 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001268 I 0.810
OPUNC04G13560 Oryza punctata OPUNC04G13560 I 0.909
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I 0.909
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I 0.909
PRUPE_ppa007823mg Prunus persica PRUPE_ppa007823mg I 0.662
PRUPE_ppa008732mg Prunus persica PRUPE_ppa008732mg I 0.662
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I 0.887
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.662
Sb06g019650 Sorghum bicolor Sb06g019650 I 0.909
Si012130m.g Setaria italica Si012130m.g I 0.909
Solyc02g091980.1 Solanum lycopersicum Solyc02g091980.1 I 0.695
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.666
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.683
Solyc09g008250.2 Solanum lycopersicum Solyc09g008250.2 I 0.662
Solyc10g005760.1 Solanum lycopersicum Solyc10g005760.1 I 0.852
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I 0.674
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I 0.878
TCM_030529 Theobroma cacao TCM_030529 I 0.870
PGSC0003DMG400002013 Solanum tuberosum PGSC0003DMG400002013 I 0.662
PGSC0003DMG400003890 Solanum tuberosum PGSC0003DMG400003890 I 0.662
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.666
PGSC0003DMG400008687 Solanum tuberosum PGSC0003DMG400008687 I 0.852
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.683
PGSC0003DMG400021401 Solanum tuberosum PGSC0003DMG400021401 I 0.695
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I 0.674
POPTR_0001s47430 Populus trichocarpa POPTR_0001s47430 I 0.868
POPTR_0004s22490 Populus trichocarpa POPTR_0004s22490 I 0.662
POPTR_0009s01270 Populus trichocarpa POPTR_0009s01270 I 0.662
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.676
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.676
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.680