ORGLA03G0402100 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA03G0402100 T276704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.847 0.844
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.845 0.867
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.838 0.867
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.837 0.822
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.827 0.844
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN

NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.791 0.800
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN

NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.788 0.822
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN

NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.787 0.822
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW

WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.787 0.822
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW

WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.787 0.822
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.776 0.800
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW

WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.776 0.800
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW

WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.776 0.800
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN

NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.760 0.756
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW

WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.760 0.756
AT3G10580
M07072_2.00
Arabidopsis thaliana
AWBCTTATCYWHWHH

DDWDWRGATAAGVWT
Dap-seq
OMalley et al.(2016)
AT3G10580_col_a
0.760 0.756
AT3G10580
M07073_2.00
Arabidopsis thaliana
CCGAWAAWNTCGGDD

HHCCGANWTTWTCGG
Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a
0.760 0.756
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN

NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.735 0.778
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW

WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.735 0.778
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN

NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.707 0.778
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW

WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.707 0.778
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW

WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.707 0.778
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0402100.1 Myb 21 66

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

592 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000004665 Ailuropoda melanoleuca ENSAMEG00000004665 I 0.000
Alligator_sinensis_CCG009966.1 Alligator sinensis Alligator_sinensis_CCG009966.1 I 0.000
ENSAPLG00000015301 Anas platyrhynchos ENSAPLG00000015301 I 0.000
IKZF5 Anolis carolinensis ENSACAG00000017468 I 0.000
Afo_R002865 Aptenodytes forsteri Afo_R002865 I 0.000
ENSBTAP00000032681-D1 Bos grunniens ENSBTAP00000032681-D1 I 0.000
IKZF5 Bos taurus ENSBTAG00000023847 I 0.000
Brh_R001567 Buceros rhinoceros Brh_R001567 I 0.000
Aan_R007136 Calypte anna Aan_R007136 I 0.000
IKZF5 Canis familiaris ENSCAFG00000030765 I 0.000
ENSCPOG00000025133 Cavia porcellus ENSCPOG00000025133 I 0.000
ENSCPOG00000021914 Cavia porcellus ENSCPOG00000021914 I 0.000
Cmyd_10017008 Chelonia mydas Cmyd_10017008 I 0.000
ENSCSAG00000004558 Chlorocebus sabaeus ENSCSAG00000004558 I 0.000
ikzf5 Danio rerio ENSDARG00000056491 I 0.000
IKZF5 Dasypus novemcinctus ENSDNOG00000011974 I 0.000
ENSDORG00000011805 Dipodomys ordii ENSDORG00000011805 I 0.000
ENSETEG00000004201 Echinops telfairi ENSETEG00000004201 I 0.000
ENSETEG00000017021 Echinops telfairi ENSETEG00000017021 I 0.000
ENSETEG00000002138 Echinops telfairi ENSETEG00000002138 I 0.000
IKZF5 Equus caballus ENSECAG00000006987 I 0.000
IKZF5 Felis catus ENSFCAG00000009589 I 0.000
ENSFALG00000004728 Ficedula albicollis ENSFALG00000004728 I 0.000
ENSGALG00000026700 Gallus gallus ENSGALG00000026700 I 0.000
ikzf5 Gasterosteus aculeatus ENSGACG00000009720 I 0.000
Gfo_R011989 Geospiza fortis Gfo_R011989 I 0.000
IKZF5 Gorilla gorilla ENSGGOG00000003823 I 0.000
IKZF5 Homo sapiens ENSG00000095574 I 0.000
ENSSTOG00000028669 Ictidomys tridecemlineatus ENSSTOG00000028669 I 0.000
ENSLACG00000006175 Latimeria chalumnae ENSLACG00000006175 I 0.000
ENSLOCG00000008225 Lepisosteus oculatus ENSLOCG00000008225 I 0.000
IKZF5 Loxodonta africana ENSLAFG00000012381 I 0.000
ENSP00000357881 Macaca fascicularis ENSP00000357881 I 0.000
IKZF5 Macaca mulatta ENSMMUG00000023480 I 0.000
IKZF5 Meleagris gallopavo ENSMGAG00000011599 I 0.000
ENSMICG00000000457 Microcebus murinus ENSMICG00000000457 I 0.000
ENSMODG00000007802 Monodelphis domestica ENSMODG00000007802 I 0.000
ENSMPUG00000002786 Mustela putorius furo ENSMPUG00000002786 I 0.000
Ikzf5 Mus musculus ENSMUSG00000040167 D 0.000
Myotis_brandtii_IKZF5_10011368 Myotis brandtii Myotis_brandtii_IKZF5_10011368 I 0.000
Myotis_brandtii_IKZF5_10011632 Myotis brandtii Myotis_brandtii_IKZF5_10011632 I 0.000
IKZF5 Myotis lucifugus ENSMLUG00000009538 I 0.000
ENSNLEG00000027055 Nomascus leucogenys ENSNLEG00000027055 I 0.000
IKZF5 Ochotona princeps ENSOPRG00000014214 I 0.000
ENSONIG00000016036 Oreochromis niloticus ENSONIG00000016036 I 0.000
IKZF5 Ornithorhynchus anatinus ENSOANG00000001994 I 0.000
IKZF5 Oryctolagus cuniculus ENSOCUG00000013340 I 0.000
IKZF5 Otolemur garnettii ENSOGAG00000032070 I 0.000
ENSOARG00000009064 Ovis aries ENSOARG00000009064 I 0.000
IKZF5 Pan troglodytes ENSPTRG00000003019 I 0.000
ENSPANG00000020471 Papio anubis ENSPANG00000020471 I 0.000
ENSPSIG00000008029 Pelodiscus sinensis ENSPSIG00000008029 I 0.000
Pvit_17596 Pogona vitticeps Pvit_17596 I 0.000
ENSPPYG00000002727 Pongo abelii ENSPPYG00000002727 I 0.000
IKZF5 Procavia capensis ENSPCAG00000012387 I 0.000
IKZF5 Pteropus vampyrus ENSPVAG00000016435 I 0.000
Ikzf5 Rattus norvegicus ENSRNOG00000025651 I 0.000
ENSSHAG00000011508 Sarcophilus harrisii ENSSHAG00000011508 I 0.000
IKZF5 Sus scrofa ENSSSCG00000023565 I 0.000
ENSTGUG00000011361 Taeniopygia guttata ENSTGUG00000011361 I 0.000
IKZF5 Takifugu rubripes ENSTRUG00000010762 I 0.000
ENSTSYG00000003383 Tarsius syrichta ENSTSYG00000003383 I 0.000
IKZF5 Tupaia belangeri ENSTBEG00000004379 I 0.000
Tal_R009868 Tyto alba Tal_R009868 I 0.000
ikzf5.L Xenopus laevis XB-GENE-978537 I 0.000
ikzf5 Xenopus tropicalis XB-GENE-978531 I 0.000
ENSXMAG00000016661 Xiphophorus maculatus ENSXMAG00000016661 I 0.000