PGSC0003DMG400002823 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400002823 T277530_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.745 0.785
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.706 0.710
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.706 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400007336 Myb 14 61
PGSC0003DMT400007336 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc04g005600.1 Solanum lycopersicum Solyc04g005600.1 I 0.905
Bra006296 Brassica rapa Bra006296 I 0.784
Bo2g012520 Brassica oleracea Bo2g012520 I 0.784
Gorai.008G179600 Gossypium raimondii Gorai.008G179600 I 0.779
cassava3811.m1 Manihot esculenta cassava3811.m1 I 0.757
SapurV1A.0063s0570 Salix purpurea SapurV1A.0063s0570 I 0.756
POPTR_0010s17300 Populus trichocarpa POPTR_0010s17300 I 0.756
Cucsa.158170 Cucumis sativus Cucsa.158170 I 0.756
TCM_011659 Theobroma cacao TCM_011659 I 0.756
Cla010483 Citrullus lanatus Cla010483 I 0.756
GRMZM2G079123 Zea mays GRMZM2G079123 I 0.751
cassava360.valid.m1 Manihot esculenta cassava360.valid.m1 I 0.745
Bostr.1460s0105 Boechera stricta Bostr.1460s0105 I 0.745
OB08G23170 Oryza brachyantha OB08G23170 I 0.745
Carubv10013887m.g Capsella rubella Carubv10013887m.g I 0.745
gene04423-v1.0-hybrid Fragaria vesca gene04423-v1.0-hybrid I 0.745
GLYMA18G49630 Glycine max GLYMA18G49630 I 0.745
GLYMA13G05550 Glycine max GLYMA13G05550 I 0.745
evm.TU.supercontig_14.102 Carica papaya evm.TU.supercontig_14.102 I 0.745
Ciclev10011948m.g Citrus clementina Ciclev10011948m.g I 0.745
LPERR08G12960 Leersia perrieri LPERR08G12960 I 0.745
OBART08G15700 Oryza barthii OBART08G15700 I 0.745
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.745
OLONG_004507 Oryza longistaminata OLONG_004507 I 0.745
Si013994m.g Setaria italica Si013994m.g I 0.745
ORGLA08G0137800 Oryza glaberrima ORGLA08G0137800 I 0.745
OPUNC08G13770 Oryza punctata OPUNC08G13770 I 0.745
PRUPE_ppa006769mg Prunus persica PRUPE_ppa006769mg I 0.745
ORUFI08G17610 Oryza rufipogon ORUFI08G17610 I 0.745
PGSC0003DMG400001339 Solanum tuberosum PGSC0003DMG400001339 I 0.745
POPTR_0017s12230 Populus trichocarpa POPTR_0017s12230 I 0.745
TCM_018639 Theobroma cacao TCM_018639 I 0.745
ONIVA08G16810 Oryza nivara ONIVA08G16810 I 0.745
OGLUM08G16450 Oryza glumaepatula OGLUM08G16450 I 0.745
Pm015916 Prunus mume Pm015916 I 0.745
GLYMA09G37040 Glycine max GLYMA09G37040 I 0.745
OMERI08G12990 Oryza meridionalis OMERI08G12990 I 0.745
VIT_14s0108g01080 Vitis vinifera VIT_14s0108g01080 I 0.745
Ca_10504 Cicer arietinum Ca_10504 I 0.745
cassava1759.valid.m1 Manihot esculenta cassava1759.valid.m1 I 0.745
Eucgr.J01362 Eucalyptus grandis Eucgr.J01362 I 0.745
Bra039142 Brassica rapa Bra039142 I 0.745
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.745
MDP0000742771 Malus domestica MDP0000742771 I 0.745
MDP0000278681 Malus domestica MDP0000278681 I 0.745
MDP0000274301 Malus domestica MDP0000274301 I 0.745
Pavir.J33881 Panicum virgatum Pavir.J33881 I 0.745
Bo5g156410 Brassica oleracea Bo5g156410 I 0.745
MYB106 Arabidopsis thaliana AT3G01140 D 0.745
LjSGA_020545.1 Lotus japonicus LjSGA_020545.1 I 0.745
PK22137.1 Cannabis sativa PK22137.1 I 0.745
BGIOSGA026935 Oryza indica BGIOSGA026935 I 0.745
SapurV1A.0438s0010 Salix purpurea SapurV1A.0438s0010 I 0.745
MDP0000121476 Malus domestica MDP0000121476 I 0.745
orange1.1g016708m.g Citrus sinensis orange1.1g016708m.g I 0.745
MYB106 Arabidopsis lyrata fgenesh2_kg.3__117__AT3G01140.1 I 0.745
Gorai.012G052500 Gossypium raimondii Gorai.012G052500 I 0.745
Lus10033003.g Linum usitatissimum Lus10033003.g I 0.745
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.745
Carubv10001433m.g Capsella rubella Carubv10001433m.g I 0.739
Bra023515 Brassica rapa Bra023515 I 0.739
ATMYB16 Arabidopsis lyrata fgenesh2_kg.6__1513__AT5G15310.1 I 0.739
Ca_22367 Cicer arietinum Ca_22367 I 0.739
AMTR_s00010p00267100 Amborella trichopoda AMTR_s00010p00267100 I 0.739
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.739
Thhalv10014101m.g Eutrema salsugineum Thhalv10014101m.g I 0.739
Bo3g010230 Brassica oleracea Bo3g010230 I 0.739
Bo9g164230 Brassica oleracea Bo9g164230 I 0.739
Bra008705 Brassica rapa Bra008705 I 0.739
Cagra.1036s0022 Capsella grandiflora Cagra.1036s0022 I 0.739
Bostr.2902s0269 Boechera stricta Bostr.2902s0269 I 0.739
mgf016794m Mimulus guttatus mgf016794m I 0.736
GLYMA19G02890 Glycine max GLYMA19G02890 I 0.735
BRADI3G36660 Brachypodium distachyon BRADI3G36660 I 0.734
MTR_4g082290 Medicago truncatula MTR_4g082290 I 0.733
Ca_27606 Cicer arietinum Ca_27606 I 0.733
MDP0000716457 Malus domestica MDP0000716457 I 0.733
GLYMA07G35561 Glycine max GLYMA07G35561 I 0.733
GLYMA20G04240 Glycine max GLYMA20G04240 I 0.733
VIT_17s0000g06410 Vitis vinifera VIT_17s0000g06410 I 0.731
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.730
Sb07g021210 Sorghum bicolor Sb07g021210 I 0.729
GRMZM2G111117 Zea mays GRMZM2G111117 I 0.729
VIT_01s0026g02770 Vitis vinifera VIT_01s0026g02770 I 0.726
Gorai.013G088300 Gossypium raimondii Gorai.013G088300 I 0.726
chr1.CM0141.320.nc Lotus japonicus chr1.CM0141.320.nc I 0.725
Bra021483 Brassica rapa Bra021483 I 0.725
Solyc02g088190.2 Solanum lycopersicum Solyc02g088190.2 I 0.725
MTR_6g012690 Medicago truncatula MTR_6g012690 I 0.725
Bo1g157620 Brassica oleracea Bo1g157620 I 0.725
SapurV1A.0302s0210 Salix purpurea SapurV1A.0302s0210 I 0.724
SapurV1A.3756s0010 Salix purpurea SapurV1A.3756s0010 I 0.724
SapurV1A.0801s0120 Salix purpurea SapurV1A.0801s0120 I 0.720
POPTR_0008s08870 Populus trichocarpa POPTR_0008s08870 I 0.720
POPTR_0008s08920 Populus trichocarpa POPTR_0008s08920 I 0.715
GSMUA_Achr10G29680_001 Musa acuminata GSMUA_Achr10G29680_001 I 0.714
cassava20416.m1 Manihot esculenta cassava20416.m1 I 0.713
mgf014886m Mimulus guttatus mgf014886m I 0.707
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.706
Carubv10006864m.g Capsella rubella Carubv10006864m.g I 0.706
Cagra.3356s0071 Capsella grandiflora Cagra.3356s0071 I 0.706
Solyc05g007690.1 Solanum lycopersicum Solyc05g007690.1 I 0.706
PGSC0003DMG400018439 Solanum tuberosum PGSC0003DMG400018439 I 0.706
MYB39 Arabidopsis lyrata fgenesh2_kg.7__2528__AT4G17785.1 I 0.706
MYB39 Arabidopsis thaliana AT4G17785 D 0.706
orange1.1g039016m.g Citrus sinensis orange1.1g039016m.g I 0.705
Ciclev10033327m.g Citrus clementina Ciclev10033327m.g I 0.705
Solyc01g010910.1 Solanum lycopersicum Solyc01g010910.1 I 0.704
PGSC0003DMG400024299 Solanum tuberosum PGSC0003DMG400024299 I 0.704
MTR_4g082230 Medicago truncatula MTR_4g082230 I 0.703
Lus10015712.g Linum usitatissimum Lus10015712.g I 0.703
Lus10019086.g Linum usitatissimum Lus10019086.g I 0.703
Gorai.007G236800 Gossypium raimondii Gorai.007G236800 I 0.701
TCM_001102 Theobroma cacao TCM_001102 I 0.701
MTR_7g011170 Medicago truncatula MTR_7g011170 I 0.700
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I 0.699
GSMUA_Achr5G23240_001 Musa acuminata GSMUA_Achr5G23240_001 I 0.699
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I 0.699
MDP0000204699 Malus domestica MDP0000204699 I 0.697
F775_12009 Aegilops tauschii F775_12009 I 0.695
Traes_2AL_097BADCFE Triticum aestivum Traes_2AL_097BADCFE I 0.695
Traes_2DL_BDECC07BD Triticum aestivum Traes_2DL_BDECC07BD I 0.695
PK26207.1 Cannabis sativa PK26207.1 I 0.695
Traes_2BL_230A3A2D0 Triticum aestivum Traes_2BL_230A3A2D0 I 0.695
Thhalv10021048m.g Eutrema salsugineum Thhalv10021048m.g I 0.695
MLOC_58915 Hordeum vulgare MLOC_58915 I 0.695
TRIUR3_01098 Triticum urartu TRIUR3_01098 I 0.695
gene30024-v1.0-hybrid Fragaria vesca gene30024-v1.0-hybrid I 0.692
Lus10026620.g Linum usitatissimum Lus10026620.g I 0.691
Pm006464 Prunus mume Pm006464 I 0.690
Solyc05g007710.2 Solanum lycopersicum Solyc05g007710.2 I 0.689
Cla016484 Citrullus lanatus Cla016484 I 0.689
PGSC0003DMG400018412 Solanum tuberosum PGSC0003DMG400018412 I 0.689
GLYMA02G12266 Glycine max GLYMA02G12266 I 0.689
Gorai.008G179800 Gossypium raimondii Gorai.008G179800 I 0.686
TCM_011660 Theobroma cacao TCM_011660 I 0.684
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I 0.684
AtMYB93 Vitis vinifera VIT_18s0001g05670 I 0.682
Gorai.003G039500 Gossypium raimondii Gorai.003G039500 I 0.679
Pm004557 Prunus mume Pm004557 I 0.677
ONIVA02G35050 Oryza nivara ONIVA02G35050 I 0.677
Cla017248 Citrullus lanatus Cla017248 I 0.677
LPERR02G26970 Leersia perrieri LPERR02G26970 I 0.677
OMERI02G31500 Oryza meridionalis OMERI02G31500 I 0.677
PRUPE_ppa026006mg Prunus persica PRUPE_ppa026006mg I 0.677
ORUFI02G34560 Oryza rufipogon ORUFI02G34560 I 0.677
ORGLA02G0284500 Oryza glaberrima ORGLA02G0284500 I 0.677
OPUNC02G30360 Oryza punctata OPUNC02G30360 I 0.677
OBART02G32900 Oryza barthii OBART02G32900 I 0.677
OB02G39890 Oryza brachyantha OB02G39890 I 0.677
OGLUM02G33500 Oryza glumaepatula OGLUM02G33500 I 0.677
MDP0000574942 Malus domestica MDP0000574942 I 0.676
Cucsa.338590 Cucumis sativus Cucsa.338590 I 0.676
Ciclev10023440m.g Citrus clementina Ciclev10023440m.g I 0.674
Gorai.013G088400 Gossypium raimondii Gorai.013G088400 I 0.674
orange1.1g047101m.g Citrus sinensis orange1.1g047101m.g I 0.674
e_gw1.389.9.1 Physcomitrella patens e_gw1.389.9.1 I 0.672
evm.TU.supercontig_752.1 Carica papaya evm.TU.supercontig_752.1 I 0.671
cassava44382.m1 Manihot esculenta cassava44382.m1 I 0.671
MDP0000320772 Malus domestica MDP0000320772 I 0.671
gene16287-v1.0-hybrid Fragaria vesca gene16287-v1.0-hybrid I 0.671
PRUPE_ppa019923mg Prunus persica PRUPE_ppa019923mg I 0.671
Pm002011 Prunus mume Pm002011 I 0.671
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.671
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.670
MDP0000302984 Malus domestica MDP0000302984 I 0.667
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.667
BGIOSGA016547 Oryza indica BGIOSGA016547 I 0.667
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.667
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.667
orange1.1g045434m.g Citrus sinensis orange1.1g045434m.g I 0.667
Ciclev10026023m.g Citrus clementina Ciclev10026023m.g I 0.667
F775_26732 Aegilops tauschii F775_26732 I 0.667
GRMZM2G032655 Zea mays GRMZM2G032655 I 0.667
MLOC_52134 Hordeum vulgare MLOC_52134 I 0.667
Gorai.009G281000 Gossypium raimondii Gorai.009G281000 I 0.667
GRMZM2G159547 Zea mays GRMZM2G159547 I 0.667
F775_26161 Aegilops tauschii F775_26161 I 0.667
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I 0.667
MDP0000228252 Malus domestica MDP0000228252 I 0.667
Gorai.009G236900 Gossypium raimondii Gorai.009G236900 I 0.667
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.667
OB04G22310 Oryza brachyantha OB04G22310 I 0.667
Traes_6DL_499F64524 Triticum aestivum Traes_6DL_499F64524 I 0.667
Traes_6BL_5A2DB8F78 Triticum aestivum Traes_6BL_5A2DB8F78 I 0.667
Traes_6BL_0D6CD031E Triticum aestivum Traes_6BL_0D6CD031E I 0.667
Traes_6DL_8BF29D46C Triticum aestivum Traes_6DL_8BF29D46C I 0.667
TRIUR3_03772 Triticum urartu TRIUR3_03772 I 0.667
ONIVA04G13130 Oryza nivara ONIVA04G13130 I 0.667
TRIUR3_25784 Triticum urartu TRIUR3_25784 I 0.667
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.667
Traes_6AL_2BA02CAA9 Triticum aestivum Traes_6AL_2BA02CAA9 I 0.667
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I 0.667
ORUFI04G16390 Oryza rufipogon ORUFI04G16390 I 0.667
OS04G0461000 Oryza sativa OS04G0461000 I 0.667
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.667
Sb04g027540 Sorghum bicolor Sb04g027540 I 0.667
Si010352m.g Setaria italica Si010352m.g I 0.667
TCM_034902 Theobroma cacao TCM_034902 I 0.667
ORGLA04G0119800 Oryza glaberrima ORGLA04G0119800 I 0.667
VIT_16s0039g01710 Vitis vinifera VIT_16s0039g01710 I 0.667
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.667
OBART04G14990 Oryza barthii OBART04G14990 I 0.667
e_gw1.106.133.1 Physcomitrella patens e_gw1.106.133.1 I 0.666
Cagra.1085s0031 Capsella grandiflora Cagra.1085s0031 I 0.666
Carubv10003148m.g Capsella rubella Carubv10003148m.g I 0.666
POPTR_0007s05360 Populus trichocarpa POPTR_0007s05360 I 0.666
e_gw1.326.5.1 Physcomitrella patens e_gw1.326.5.1 I 0.666
Bra040181 Brassica rapa Bra040181 I 0.665
Bo1g017860 Brassica oleracea Bo1g017860 I 0.665
Cucsa.312940 Cucumis sativus Cucsa.312940 I 0.664
MDP0000868578 Malus domestica MDP0000868578 I 0.664
TCM_011658 Theobroma cacao TCM_011658 I 0.664
BRADI3G38807 Brachypodium distachyon BRADI3G38807 I 0.664
Pm019588 Prunus mume Pm019588 I 0.663
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I 0.663
cassava39451.m1 Manihot esculenta cassava39451.m1 I 0.663
OB02G29290 Oryza brachyantha OB02G29290 I 0.661
OMERI02G21400 Oryza meridionalis OMERI02G21400 I 0.661
Bo2g009800 Brassica oleracea Bo2g009800 I 0.661
Bo3g099390 Brassica oleracea Bo3g099390 I 0.661
Bostr.0568s0266 Boechera stricta Bostr.0568s0266 I 0.661
Thhalv10004620m.g Eutrema salsugineum Thhalv10004620m.g I 0.661
Thhalv10014028m.g Eutrema salsugineum Thhalv10014028m.g I 0.661
ONIVA02G24090 Oryza nivara ONIVA02G24090 I 0.661
Cagra.0917s0061 Capsella grandiflora Cagra.0917s0061 I 0.661
GRMZM2G017268 Zea mays GRMZM2G017268 I 0.661
AtMYB53 Arabidopsis thaliana AT5G65230 I 0.661
BGIOSGA008493 Oryza indica BGIOSGA008493 I 0.661
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.661
Bo7g105430 Brassica oleracea Bo7g105430 I 0.661
Bra028593 Brassica rapa Bra028593 I 0.661
OGLUM02G22040 Oryza glumaepatula OGLUM02G22040 I 0.661
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.661
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.661
OBART02G21860 Oryza barthii OBART02G21860 I 0.661
OB08G25790 Oryza brachyantha OB08G25790 I 0.661
GRMZM2G110135 Zea mays GRMZM2G110135 I 0.661
Si014103m.g Setaria italica Si014103m.g I 0.661
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.661
Carubv10026822m.g Capsella rubella Carubv10026822m.g I 0.661
Sb07g028990 Sorghum bicolor Sb07g028990 I 0.661
ORUFI02G22940 Oryza rufipogon ORUFI02G22940 I 0.661
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.661
AtMYB53 Arabidopsis lyrata fgenesh2_kg.8__2570__AT5G65230.1 I 0.661
Bra012641 Brassica rapa Bra012641 I 0.661