CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0010s10710
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0010s10710
T278384_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0010s10710.1
Myb
110
159
AVEWSVEEQYKLEEGLHKYADEPTILRYIKIAAMLRDKTVRDVALRCRWM
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0062s0360
Salix purpurea
SapurV1A.0062s0360
N
0.909
SapurV1A.0200s0310
Salix purpurea
SapurV1A.0200s0310
N
0.909
POPTR_0008s14450
Populus trichocarpa
POPTR_0008s14450
N
0.896
MDP0000184131
Malus domestica
MDP0000184131
N
0.820
GLYMA11G11170
Glycine max
GLYMA11G11170
N
0.796
Lus10013072.g
Linum usitatissimum
Lus10013072.g
N
0.737
Lus10029076.g
Linum usitatissimum
Lus10029076.g
N
0.737
mgf022693m
Mimulus guttatus
mgf022693m
N
0.695
Thhalv10018953m.g
Eutrema salsugineum
Thhalv10018953m.g
N
0.688
Bra004286
Brassica rapa
Bra004286
N
0.677