POPTR_0015s08680 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0015s08680 T278475_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WER
M11047_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.733 0.840
WER
M11048_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.733 0.840
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH

DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.671 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0015s08680.1 Myb 11 58
POPTR_0015s08680.1 Myb 64 114

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action