POPTR_0017s05170 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0017s05170 T278503_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s05170.1 Myb 46 94

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1186s0090 Salix purpurea SapurV1A.1186s0090 N 0.903
SapurV1A.0947s0070 Salix purpurea SapurV1A.0947s0070 N 0.903
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N 0.740
MDP0000184998 Malus domestica MDP0000184998 N 0.738
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.735
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.735
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.735
Pm007242 Prunus mume Pm007242 N 0.732
PRUPE_ppa010592mg Prunus persica PRUPE_ppa010592mg N 0.732
MDP0000716430 Malus domestica MDP0000716430 N 0.720
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.717
TCM_019968 Theobroma cacao TCM_019968 N 0.711
TCM_019960 Theobroma cacao TCM_019960 N 0.711
cassava11792.valid.m1 Manihot esculenta cassava11792.valid.m1 N 0.710
Cucsa.095530 Cucumis sativus Cucsa.095530 N 0.703
Cla012999 Citrullus lanatus Cla012999 N 0.703
cassava11790.valid.m1 Manihot esculenta cassava11790.valid.m1 N 0.703
cassava11791.valid.m1 Manihot esculenta cassava11791.valid.m1 N 0.703
POPTR_0007s01590 Populus trichocarpa POPTR_0007s01590 N 0.674
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N 0.674
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N 0.674