CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g003140
(
Sorghum bicolor
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Sb04g003140
T279204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.758
0.851
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.724
0.787
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.724
0.787
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.680
0.809
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g003140.1
Myb
239
290
RLRWTLELHELFVKSVNKLGGPEKATPKGVLKLVKVEGLTIYHVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Sorghum bicolor
TFs
220 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy