Sb04g033680 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb04g033680 T279225_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.697 0.688
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.697 0.688
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.697 0.688
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH

DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.683 0.699
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH

DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.683 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb04g033680.1 Myb 15 62
Sb04g033680.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

458 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R006371 Calypte anna Aan_R006371 I 0.000
Afo_R010037 Aptenodytes forsteri Afo_R010037 I 0.000
Alligator_sinensis_CCG017947.1 Alligator sinensis Alligator_sinensis_CCG017947.1 I 0.000
Aqu1.203581 Amphimedon queenslandica Aqu1.203581 I 0.000
Aqu1.204705 Amphimedon queenslandica Aqu1.204705 I 0.000
Aqu1.224590 Amphimedon queenslandica Aqu1.224590 I 0.000
Brh_R005100 Buceros rhinoceros Brh_R005100 I 0.000
CapteG160905 Capitella teleta CapteG160905 I 0.000
CGI_10021920 Crassostrea gigas CGI_10021920 I 0.000
Cmyd_10002310 Chelonia mydas Cmyd_10002310 I 0.000
DNMT1 Anolis carolinensis ENSACAG00000003948 I 0.000
ENSAMEG00000011823 Ailuropoda melanoleuca ENSAMEG00000011823 I 0.000
ENSAMXG00000012182 Astyanax mexicanus ENSAMXG00000012182 I 0.000
DNMT1 Bos taurus ENSBTAG00000002736 I 0.000
DNMT1 Canis familiaris ENSCAFG00000017892 I 0.000
DNMT1 Choloepus hoffmanni ENSCHOG00000009490 I 0.000
DNMT1 Callithrix jacchus ENSCJAG00000005794 I 0.000
DNMT1 Cavia porcellus ENSCPOG00000019557 I 0.000
ENSCSAG00000007378 Chlorocebus sabaeus ENSCSAG00000007378 I 0.000
dnmt1 Danio rerio ENSDARG00000030756 I 0.000
DNMT1 Dasypus novemcinctus ENSDNOG00000003313 I 0.000
Dnmt1 Dipodomys ordii ENSDORG00000014116 I 0.000
DNMT1 Equus caballus ENSECAG00000026909 I 0.000
DNMT1 Echinops telfairi ENSETEG00000012574 I 0.000
DNMT1 Felis catus ENSFCAG00000012246 I 0.000
DNMT1 Homo sapiens ENSG00000130816 D 0.000
dnmt1 Gasterosteus aculeatus ENSGACG00000013741 I 0.000
ENSGALG00000028997 Gallus gallus ENSGALG00000028997 I 0.000
DNMT1 Gorilla gorilla ENSGGOG00000016574 I 0.000
ENSGMOG00000003491 Gadus morhua ENSGMOG00000003491 I 0.000
DNMT1 Loxodonta africana ENSLAFG00000002818 I 0.000
ENSLOCG00000007421 Lepisosteus oculatus ENSLOCG00000007421 I 0.000
ENSMEUG00000012650 Macropus eugenii ENSMEUG00000012650 I 0.000
DNMT1 Microcebus murinus ENSMICG00000010231 I 0.000
DNMT1 Myotis lucifugus ENSMLUG00000001347 I 0.000
DNMT1 Macaca mulatta ENSMMUG00000014604 I 0.000
DNMT1 Monodelphis domestica ENSMODG00000005463 I 0.000
ENSMPUG00000006829 Mustela putorius furo ENSMPUG00000006829 I 0.000
Dnmt1 Mus musculus ENSMUSG00000004099 I 0.000
ENSNLEG00000012092 Nomascus leucogenys ENSNLEG00000012092 I 0.000
ENSOANG00000012255 Ornithorhynchus anatinus ENSOANG00000012255 I 0.000
ENSOARG00000015380 Ovis aries ENSOARG00000015380 I 0.000
ENSOCUG00000008415 Oryctolagus cuniculus ENSOCUG00000008415 I 0.000
DNMT1 Otolemur garnettii ENSOGAG00000001265 I 0.000
ENSONIG00000001574 Oreochromis niloticus ENSONIG00000001574 I 0.000
DNMT1 Ochotona princeps ENSOPRG00000007032 I 0.000
dnmt1 Oryzias latipes ENSORLG00000005582 I 0.000
ENSP00000352516 Macaca fascicularis ENSP00000352516 I 0.000
ENSP00000352516-D1 Bos grunniens ENSP00000352516-D1 I 0.000
ENSPANG00000001264 Papio anubis ENSPANG00000001264 I 0.000
DNMT1 Procavia capensis ENSPCAG00000011023 I 0.000
ENSPFOG00000005624 Poecilia formosa ENSPFOG00000005624 I 0.000
ENSPMAG00000002148 Petromyzon marinus ENSPMAG00000002148 I 0.000
ENSPPYG00000009545 Pongo abelii ENSPPYG00000009545 I 0.000
ENSPSIG00000002916 Pelodiscus sinensis ENSPSIG00000002916 I 0.000
DNMT1 Pan troglodytes ENSPTRG00000010461 I 0.000
DNMT1 Pteropus vampyrus ENSPVAG00000003676 I 0.000
Dnmt1 Rattus norvegicus ENSRNOG00000039859 I 0.000
ENSSHAG00000008894 Sarcophilus harrisii ENSSHAG00000008894 I 0.000
DNMT1 Sus scrofa ENSSSCG00000013659 I 0.000
ENSSTOG00000010841 Ictidomys tridecemlineatus ENSSTOG00000010841 I 0.000
ENSTGUG00000013708 Taeniopygia guttata ENSTGUG00000013708 I 0.000
dnmt1 Tetraodon nigroviridis ENSTNIG00000018567 I 0.000
dnmt1 Takifugu rubripes ENSTRUG00000008132 I 0.000
DNMT1 Tursiops truncatus ENSTTRG00000003178 I 0.000
DNMT1 Vicugna pacos ENSVPAG00000006117 I 0.000
ENSXMAG00000018063 Xiphophorus maculatus ENSXMAG00000018063 I 0.000
Gfo_R002685 Geospiza fortis Gfo_R002685 I 0.000
HelroG116156 Helobdella robusta HelroG116156 I 0.000
LotgiG171288 Lottia gigantea LotgiG171288 I 0.000
Myotis_brandtii_DNMT1_10007965 Myotis brandtii Myotis_brandtii_DNMT1_10007965 I 0.000
NEMVEDRAFT_v1g125496 Nematostella vectensis NEMVEDRAFT_v1g125496 I 0.000
NV11649 Nasonia vitripennis NV11649 I 0.000
Ocbimv22034501m.g Octopus bimaculoides Ocbimv22034501m.g I 0.000
Ogr12994 Ophisaurus gracilis Ogr12994 I 0.000
Pvit_03471 Pogona vitticeps Pvit_03471 I 0.000
Sakowv30005306m.g Saccoglossus kowalevskii Sakowv30005306m.g I 0.000
dnmt1.S Xenopus laevis XB-GENE-17332488 I 0.000
dnmt1 Xenopus tropicalis XB-GENE-965562 I 0.000
dnmt1.L Xenopus laevis XB-GENE-965566 I 0.000