SELMODRAFT_39481 (Selaginella moellendorffii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 SELMODRAFT_39481 T279511_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYBP_MAIZE
M11057_2.00
Zea mays
ACCWACCHN

NDGGTWGGT
Transfac
Matys et al.(2006)
P$P_01
0.682 0.721
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ25905 Myb 14 61
EFJ25905 Myb 67 87

Links

Other Myb/SANT family TFs
Other Selaginella moellendorffii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_04823 Aegilops tauschii F775_04823 I 0.713
AMTR_s00048p00210040 Amborella trichopoda AMTR_s00048p00210040 N 0.683
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I 0.675
evm.TU.supercontig_43.122 Carica papaya evm.TU.supercontig_43.122 N 0.663
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.663
MLOC_69570 Hordeum vulgare MLOC_69570 I 0.682
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.677
MDP0000582174 Malus domestica MDP0000582174 N 0.687
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.694
mgf004018m Mimulus guttatus mgf004018m N 0.682
mgf019239m Mimulus guttatus mgf019239m N 0.663
ORGLA12G0042500 Oryza glaberrima ORGLA12G0042500 N 0.668
BGIOSGA022508 Oryza indica BGIOSGA022508 N 0.675
BGIOSGA003347 Oryza indica BGIOSGA003347 I 0.665
OLONG_002280 Oryza longistaminata OLONG_002280 I 0.682
OS08G0433400 Oryza sativa OS08G0433400 N 0.672
Pavir.J22834 Panicum virgatum Pavir.J22834 N 0.661
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.682
POPTR_0002s15900 Populus trichocarpa POPTR_0002s15900 N 0.668
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N 0.673
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N 0.686
SELMODRAFT_39516 Selaginella moellendorffii SELMODRAFT_39516 N 0.815
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.909
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N 0.815
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I 0.706
Traes_4BL_F7B9CBA99 Triticum aestivum Traes_4BL_F7B9CBA99 N 0.679
TRIUR3_28515 Triticum urartu TRIUR3_28515 N 0.665
TRIUR3_23036 Triticum urartu TRIUR3_23036 N 0.678
GRMZM2G000818 Zea mays GRMZM2G000818 I 0.713
GRMZM2G016020 Zea mays GRMZM2G016020 I 0.737
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.682
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.702
GRMZM2G129872 Zea mays GRMZM2G129872 I 0.737
GRMZM2G124715 Zea mays GRMZM2G124715 I 0.692