Si010794m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si010794m.g T279752_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.833 0.894
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.833 0.894
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.761 0.787
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.761 0.787
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.761 0.787
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.761 0.787
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.761 0.787
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.761 0.787
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.761 0.787
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.748 0.766
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.742 0.745
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.742 0.745
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.742 0.745
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.717 0.723
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.717 0.723
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.712 0.745
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.711 0.809
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.711 0.809
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.711 0.809
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.711 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si010794m Myb 21 72

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

836 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00044p00042560 Amborella trichopoda AMTR_s00044p00042560 I 0.000
AT4G04605 Arabidopsis thaliana AT4G04605 I 0.000
BGIOSGA008790 Oryza indica BGIOSGA008790 I 0.000
BGIOSGA016936 Oryza indica BGIOSGA016936 I 0.000
Bo2g104640 Brassica oleracea Bo2g104640 I 0.000
Bostr.24340s0004 Boechera stricta Bostr.24340s0004 I 0.000
Bostr.7199s0006 Boechera stricta Bostr.7199s0006 I 0.000
BRADI1G71910 Brachypodium distachyon BRADI1G71910 I 0.000
BRADI3G51410 Brachypodium distachyon BRADI3G51410 I 0.000
BRADI5G18590 Brachypodium distachyon BRADI5G18590 N 0.000
Cagra.4137s0009 Capsella grandiflora Cagra.4137s0009 I 0.000
Carubv10003097m.g Capsella rubella Carubv10003097m.g I 0.000
chr5.LjT14K23.60.nc Lotus japonicus chr5.LjT14K23.60.nc I 0.000
Ciclev10018145m.g Citrus clementina Ciclev10018145m.g I 0.000
Cla017202 Citrullus lanatus Cla017202 I 0.000
F775_04264 Aegilops tauschii F775_04264 I 0.000
F775_22605 Aegilops tauschii F775_22605 I 0.000
GLYMA20G24290 Glycine max GLYMA20G24290 I 0.000
GRMZM2G069525 Zea mays GRMZM2G069525 I 0.000
GRMZM2G090230 Zea mays GRMZM2G090230 I 0.000
LPERR02G22340 Leersia perrieri LPERR02G22340 I 0.000
LPERR04G17940 Leersia perrieri LPERR04G17940 I 0.000
mgf019744m Mimulus guttatus mgf019744m I 0.000
MLOC_56821 Hordeum vulgare MLOC_56821 I 0.000
MLOC_67081 Hordeum vulgare MLOC_67081 N 0.000
OB04G28940 Oryza brachyantha OB04G28940 I 0.000
OBART02G27470 Oryza barthii OBART02G27470 I 0.000
OBART04G21930 Oryza barthii OBART04G21930 I 0.000
OGLUM02G28020 Oryza glumaepatula OGLUM02G28020 I 0.000
OGLUM04G21960 Oryza glumaepatula OGLUM04G21960 I 0.000
OLONG_000346 Oryza longistaminata OLONG_000346 I 0.000
OLONG_016687 Oryza longistaminata OLONG_016687 I 0.000
OMERI02G26760 Oryza meridionalis OMERI02G26760 I 0.000
OMERI04G18450 Oryza meridionalis OMERI04G18450 I 0.000
ONIVA02G30300 Oryza nivara ONIVA02G30300 I 0.000
ONIVA04G20480 Oryza nivara ONIVA04G20480 I 0.000
OPUNC02G25130 Oryza punctata OPUNC02G25130 I 0.000
OPUNC04G19690 Oryza punctata OPUNC04G19690 I 0.000
orange1.1g043383m.g Citrus sinensis orange1.1g043383m.g I 0.000
ORGLA02G0236600 Oryza glaberrima ORGLA02G0236600 I 0.000
ORGLA04G0189700 Oryza glaberrima ORGLA04G0189700 I 0.000
ORUFI02G28930 Oryza rufipogon ORUFI02G28930 I 0.000
ORUFI04G23540 Oryza rufipogon ORUFI04G23540 I 0.000
OS04G0566600 Oryza sativa OS04G0566600 I 0.000
Pavir.Gb01051 Panicum virgatum Pavir.Gb01051 I 0.000
Pavir.J09702 Panicum virgatum Pavir.J09702 I 0.000
Pm010236 Prunus mume Pm010236 I 0.000
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I 0.000
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I 0.000
Sb06g025600 Sorghum bicolor Sb06g025600 I 0.000
Si011884m.g Setaria italica Si011884m.g I 0.000
Thhalv10008620m.g Eutrema salsugineum Thhalv10008620m.g I 0.000
TRIUR3_18158 Triticum urartu TRIUR3_18158 I 0.000