Si024344m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si024344m.g T279841_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.676 0.753
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW

WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.676 0.753
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH

DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.676 0.753
F3A4.140
M02299_2.00
Arabidopsis thaliana
YAACBGYY

RRCVGTTR
PBM
Weirauch et al.(2014)
pTH7112
0.675 0.763
F3A4.140
M07095_2.00
Arabidopsis thaliana
TAACBGYHWHNNHNN

NNDNNDWDRCVGTTA
Dap-seq
OMalley et al.(2016)
MYB77_col_a
0.675 0.763
F3A4.140
M07096_2.00
Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV

BKTWWDWTASGGTTRCGGTT
Dap-seq
OMalley et al.(2016)
MYB77_colamp_a
0.675 0.763
F3A4.140
M02701_2.00
Arabidopsis thaliana
SYAACYGYCVHBN

NVDBGRCRGTTRS
SELEX
Mathelier et al.(2014)
MA0575.1
0.675 0.763
F3A4.140
M11044_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB77_01
0.675 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si024344m Myb 32 78
Si024344m Myb 84 129

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29801.m003096 Ricinus communis 29801.m003096 I 0.687
29814.m000736 Ricinus communis 29814.m000736 I 0.684
AC213884.3_FG002 Zea mays AC213884.3_FG002 N 0.855
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.673
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.706
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.687
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.676
BGIOSGA000485 Oryza indica BGIOSGA000485 I 0.666
BGIOSGA018238 Oryza indica BGIOSGA018238 I 0.752
BGIOSGA018239 Oryza indica BGIOSGA018239 I 0.761
Bo2g167960 Brassica oleracea Bo2g167960 I 0.694
Bo3g153550 Brassica oleracea Bo3g153550 I 0.664
Bo7g063830 Brassica oleracea Bo7g063830 I 0.676
Bo7g118450 Brassica oleracea Bo7g118450 I 0.675
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.676
Bra012149 Brassica rapa Bra012149 I 0.676
BRADI2G28910 Brachypodium distachyon BRADI2G28910 N 0.802
BRADI2G55040 Brachypodium distachyon BRADI2G55040 I 0.664
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.676
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.676
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.684
Ca_12468 Cicer arietinum Ca_12468 I 0.691
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.696
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.675
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.697
Cla004431 Citrullus lanatus Cla004431 I 0.677
Cla014191 Citrullus lanatus Cla014191 I 0.668
Cla020946 Citrullus lanatus Cla020946 I 0.684
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.671
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.668
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.667
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.674
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.670
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.672
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.664
F3A4.140 Arabidopsis thaliana AT3G50060 D 0.675
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.684
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.664
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.671
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.665
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.668
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.699
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.677
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.675
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.666
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.679
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.664
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.666
GRMZM2G369799 Zea mays GRMZM2G369799 I 0.670
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.694
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.692
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.706
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.676
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.697
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.697
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.666
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.694
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.666
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.740
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.679
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.694
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.694
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.679
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.676
MDP0000298689 Malus domestica MDP0000298689 I 0.678
mgf002573m Mimulus guttatus mgf002573m I 0.670
mgf014089m Mimulus guttatus mgf014089m I 0.678
mgf023922m Mimulus guttatus mgf023922m I 0.713
MLOC_26177 Hordeum vulgare MLOC_26177 N 0.716
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.726
MYB44 Arabidopsis thaliana AT5G67300 D 0.676
OB01G46120 Oryza brachyantha OB01G46120 I 0.666
OBART01G37390 Oryza barthii OBART01G37390 I 0.666
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I 0.666
OGLUM05G13590 Oryza glumaepatula OGLUM05G13590 I 0.773
OLONG_001357 Oryza longistaminata OLONG_001357 I 0.666
OMERI01G34370 Oryza meridionalis OMERI01G34370 I 0.666
OMERI05G11510 Oryza meridionalis OMERI05G11510 I 0.773
ONIVA01G42300 Oryza nivara ONIVA01G42300 I 0.666
ONIVA05G13470 Oryza nivara ONIVA05G13470 I 0.773
OPUNC01G36300 Oryza punctata OPUNC01G36300 I 0.666
OPUNC05G11020 Oryza punctata OPUNC05G11020 I 0.773
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.675
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.697
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I 0.666
ORGLA05G0109400 Oryza glaberrima ORGLA05G0109400 I 0.773
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I 0.666
ORUFI05G13850 Oryza rufipogon ORUFI05G13850 I 0.773
OS01G0850400 Oryza sativa OS01G0850400 I 0.666
Pavir.Ca02945 Panicum virgatum Pavir.Ca02945 I 0.670
Pavir.Cb00156 Panicum virgatum Pavir.Cb00156 I 0.670
Pavir.J33236 Panicum virgatum Pavir.J33236 I 0.869
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.666
PK17282.1 Cannabis sativa PK17282.1 I 0.663
Pm018951 Prunus mume Pm018951 I 0.667
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.671
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.684
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I 0.665
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.684
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.684
Sb09g016570 Sorghum bicolor Sb09g016570 I 0.862
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.666
TCM_000696 Theobroma cacao TCM_000696 I 0.675
TCM_007138 Theobroma cacao TCM_007138 I 0.712
TCM_042474 Theobroma cacao TCM_042474 I 0.691
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.676
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.670
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.688